DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGRP-SC2 and pglyrp2

DIOPT Version :10

Sequence 1:NP_610410.1 Gene:PGRP-SC2 / 35862 FlyBaseID:FBgn0043575 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_001038631.1 Gene:pglyrp2 / 568634 ZFINID:ZDB-GENE-071227-1 Length:458 Species:Danio rerio


Alignment Length:167 Identity:56/167 - (33%)
Similarity:90/167 - (53%) Gaps:5/167 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 TIISKSEWGGRSATSKTSLAN-YLSYAVIHHTA--GNYCSTKAACITQLQNIQAYHMDSLGWADI 83
            :||.:..||.........|.: .:|:..|||||  ...|.....|...::.:|.:|....||.||
Zfish   286 SIIPRCIWGAAPPQVPLELLSPPMSFLYIHHTAIPSKPCLNLQTCSQNMRAMQRFHQKDWGWYDI 350

  Fly    84 GYNFLIGGDGNVYEGRGWNVMGAHATNWNSKSIGISFLGNYNTNTLTSAQITAAK-GLLSDAVSR 147
            ||:|::|.||.:||||||...|||....|:...|::|:|:|:....::..:...: .|:...|:.
Zfish   351 GYSFVVGSDGYIYEGRGWMSQGAHTKGRNNVGYGVAFIGDYSGRLPSTHDMELVRHHLVKCGVNN 415

  Fly   148 GQIVSGYILYGHRQ-VGSTECPGTNIWNEIRTWSNWK 183
            |.:...:.:.|||| |.:|.|||..:::||.||.::|
Zfish   416 GFLQEDFTILGHRQVVVTTSCPGNALYSEITTWMHYK 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-SC2NP_610410.1 PGRP 21..162 CDD:128941 46/144 (32%)
pglyrp2NP_001038631.1 PGRP 285..430 CDD:128941 45/143 (31%)

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