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Protein Alignment PGRP-SC2 and pglyrp2
DIOPT Version :9
Sequence 1: | NP_610410.1 |
Gene: | PGRP-SC2 / 35862 |
FlyBaseID: | FBgn0043575 |
Length: | 184 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001038631.1 |
Gene: | pglyrp2 / 568634 |
ZFINID: | ZDB-GENE-071227-1 |
Length: | 458 |
Species: | Danio rerio |
Alignment Length: | 167 |
Identity: | 56/167 - (33%) |
Similarity: | 90/167 - (53%) |
Gaps: | 5/167 - (2%) |
- Green bases have known domain annotations that are detailed below.
Fly 22 TIISKSEWGGRSATSKTSLAN-YLSYAVIHHTA--GNYCSTKAACITQLQNIQAYHMDSLGWADI 83
:||.:..||.........|.: .:|:..||||| ...|.....|...::.:|.:|....||.||
Zfish 286 SIIPRCIWGAAPPQVPLELLSPPMSFLYIHHTAIPSKPCLNLQTCSQNMRAMQRFHQKDWGWYDI 350
Fly 84 GYNFLIGGDGNVYEGRGWNVMGAHATNWNSKSIGISFLGNYNTNTLTSAQITAAK-GLLSDAVSR 147
||:|::|.||.:||||||...|||....|:...|::|:|:|:....::..:...: .|:...|:.
Zfish 351 GYSFVVGSDGYIYEGRGWMSQGAHTKGRNNVGYGVAFIGDYSGRLPSTHDMELVRHHLVKCGVNN 415
Fly 148 GQIVSGYILYGHRQ-VGSTECPGTNIWNEIRTWSNWK 183
|.:...:.:.|||| |.:|.|||..:::||.||.::|
Zfish 416 GFLQEDFTILGHRQVVVTTSCPGNALYSEITTWMHYK 452
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-SC2 | NP_610410.1 |
PGRP |
21..162 |
CDD:128941 |
46/144 (32%) |
pglyrp2 | NP_001038631.1 |
PGRP |
285..430 |
CDD:128941 |
45/143 (31%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C170586828 |
Domainoid |
1 |
1.000 |
129 |
1.000 |
Domainoid score |
I5198 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1110472at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000842 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_101717 |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
6 | 5.750 |
|
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