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Protein Alignment PGRP-SC2 and Pglyrp3
DIOPT Version :9
Sequence 1: | NP_610410.1 |
Gene: | PGRP-SC2 / 35862 |
FlyBaseID: | FBgn0043575 |
Length: | 184 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001178890.1 |
Gene: | Pglyrp3 / 499658 |
RGDID: | 1593164 |
Length: | 339 |
Species: | Rattus norvegicus |
Alignment Length: | 162 |
Identity: | 60/162 - (37%) |
Similarity: | 97/162 - (59%) |
Gaps: | 3/162 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 23 IISKSEWGGRSA-TSKTSLANYLSYAVIHHTAGNYCSTKAACITQLQNIQAYHMDSLGWADIGYN 86
||.::.|..|.. .|:.:|. ..:.:|.||||..|:..|.|:.::::.|::|||...:.||.|:
Rat 179 IIPRTAWEARETHCSQMNLP--AKFVIIIHTAGESCNESADCLIRVRDTQSFHMDKQDFCDIAYH 241
Fly 87 FLIGGDGNVYEGRGWNVMGAHATNWNSKSIGISFLGNYNTNTLTSAQITAAKGLLSDAVSRGQIV 151
||:|.||.||||.||.:.|:|...:|..::||:|:||:.......|.:.||:.|:..||:.|.:.
Rat 242 FLVGQDGVVYEGVGWTIEGSHTYGYNDIALGIAFMGNFVEKPPNEASLEAAQSLIQCAVAMGYLA 306
Fly 152 SGYILYGHRQVGSTECPGTNIWNEIRTWSNWK 183
|.|:|.||..|.:...||..::|.|:||.::|
Rat 307 SNYLLMGHSDVSNILSPGQALYNIIKTWPHFK 338
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-SC2 | NP_610410.1 |
PGRP |
21..162 |
CDD:128941 |
52/139 (37%) |
Pglyrp3 | NP_001178890.1 |
PGRP |
19..152 |
CDD:128941 |
|
PGRP |
177..317 |
CDD:128941 |
52/139 (37%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
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