powered by:
Protein Alignment PGRP-SC2 and PGRP-SB2
DIOPT Version :9
Sequence 1: | NP_610410.1 |
Gene: | PGRP-SC2 / 35862 |
FlyBaseID: | FBgn0043575 |
Length: | 184 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001261970.1 |
Gene: | PGRP-SB2 / 39869 |
FlyBaseID: | FBgn0043577 |
Length: | 191 |
Species: | Drosophila melanogaster |
Alignment Length: | 117 |
Identity: | 46/117 - (39%) |
Similarity: | 66/117 - (56%) |
Gaps: | 2/117 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 LAVLFCAQAVLGVTIISKSEWGGRSATSK-TSLANYLSYAVIHHTAGNYCSTKAACITQLQNIQA 72
||::.|...:....|:.:|.|.....:.: ..|...:...:||||....|.....|...|:.|:|
Fly 5 LALVLCGLTLALGQIVPRSSWCPVPISPRMPRLMVPVRLIIIHHTVTAPCFNPHQCQLVLRQIRA 69
Fly 73 YHMDSLGWADIGYNFLIGGDGNVYEGRGWNVMGAHATNWNSKSIGISFLGNY 124
.|| ...:.||||||||||||.:|||.|:.:.|.||..:||:||||:|:||:
Fly 70 DHM-RRKFRDIGYNFLIGGDGRIYEGLGFGIRGEHAPRYNSQSIGIAFIGNF 120
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-SC2 | NP_610410.1 |
PGRP |
21..162 |
CDD:128941 |
43/105 (41%) |
PGRP-SB2 | NP_001261970.1 |
PGRP |
18..>129 |
CDD:128941 |
43/104 (41%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C45440238 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1110472at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000842 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm26632 |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
P |
PTHR11022 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
6 | 5.950 |
|
Return to query results.
Submit another query.