Protein Alignment PGRP-SC2 and PGRP-LD

DIOPT Version :9

• Sequence 1: NP_610410.1
• Gene: PGRP-SC2 / 35862
• FlyBaseID: FBgn0043575
• Length: 184
• Species: Drosophila melanogaster
• Sequence 2: NP_001137893.1
• Gene: PGRP-LD / 3771920
• FlyBaseID: FBgn0260458
• Length: 327
• Species: Drosophila melanogaster
• Alignment Length: 191
• Identity: 45/191 - (23%)
• Similarity: 84/191 - (43%)
• Gaps: 23/191 - (12%)

  Fly     1 MANKALILLAVLFCAQAV-----LGVTIISKSEWGGRSATSKTSLANYLSY--AVIHHTAGNYCS 58
            |...||.|.|.|...|..     ..::|:....|.......:.:|.:.:..  .:..||..|.|.
  Fly   144 MCASALALAAYLLWRQTQTPDFGYRLSIVGHGIWSDMELQGRGTLFDPIGVGTVIFTHTGSNECH 208

  Fly    59 TKAACITQLQNIQAYHMDSLGWADIGYNFLIGGDGNVYEGRGWNVMGAHATNWNS-KSIGISFLG 122
            ..  |...|..::..|:     .::.||||:.||..|:|.:||:....:..:.|. .|:.::|:|
  Fly   209 DD--CPDVLHKLERSHV-----GELPYNFLVAGDCQVFEAQGWHYRSQYPRDLNGIDSLVMAFVG 266

  Fly   123 NYNTNTLTSAQITAAKGLLSDAVSRGQIVSGYILYGHRQVGS-TECPGTNIWNEIRTWSNW 182
            |::.......|:.||:.|:.:::.|..:...|.|:   .:|| |:.    :..|:|.|.::
  Fly   267 NFSGRPPIDCQLMAAQALILESLKRRILQPIYQLF---VLGSYTDA----LQRELRHWPHY 320

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
PGRP-SC2	NP_610410.1	PGRP	21..162	CDD:128941	32/143 (22%)
PGRP-LD	NP_001137893.1	PGRP	169..306	CDD:128941	33/146 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45440262
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR11022
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.940