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Protein Alignment PGRP-SC2 and PGRP-SC1a
DIOPT Version :9
Sequence 1: | NP_610410.1 |
Gene: | PGRP-SC2 / 35862 |
FlyBaseID: | FBgn0043575 |
Length: | 184 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_610407.1 |
Gene: | PGRP-SC1a / 35859 |
FlyBaseID: | FBgn0043576 |
Length: | 185 |
Species: | Drosophila melanogaster |
Alignment Length: | 183 |
Identity: | 126/183 - (68%) |
Similarity: | 147/183 - (80%) |
Gaps: | 1/183 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MANKALILLAVLFCAQAVL-GVTIISKSEWGGRSATSKTSLANYLSYAVIHHTAGNYCSTKAACI 64
|.:|..:|||||.|:|.:. ||.::||:|||||.|.....|.||||||:||||||:||.|:|.|.
Fly 1 MVSKVALLLAVLVCSQYMAQGVYVVSKAEWGGRGAKWTVGLGNYLSYAIIHHTAGSYCETRAQCN 65
Fly 65 TQLQNIQAYHMDSLGWADIGYNFLIGGDGNVYEGRGWNVMGAHATNWNSKSIGISFLGNYNTNTL 129
..||::|.||||||||.|||||||||||||||||||||.|||||..||..|||||||||||.:||
Fly 66 AVLQSVQNYHMDSLGWPDIGYNFLIGGDGNVYEGRGWNNMGAHAAEWNPYSIGISFLGNYNWDTL 130
Fly 130 TSAQITAAKGLLSDAVSRGQIVSGYILYGHRQVGSTECPGTNIWNEIRTWSNW 182
....|:||:.||:|||:|||:.|||||||||||.:||||||:||||||.||:|
Fly 131 EPNMISAAQQLLNDAVNRGQLSSGYILYGHRQVSATECPGTHIWNEIRGWSHW 183
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-SC2 | NP_610410.1 |
PGRP |
21..162 |
CDD:128941 |
99/140 (71%) |
PGRP-SC1a | NP_610407.1 |
PGRP |
22..163 |
CDD:128941 |
99/140 (71%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C45440235 |
Domainoid |
1 |
1.000 |
129 |
1.000 |
Domainoid score |
I5198 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
1 |
1.000 |
- |
- |
|
H130057 |
Inparanoid |
1 |
1.050 |
136 |
1.000 |
Inparanoid score |
I4536 |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1110472at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000842 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm26632 |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_101717 |
Panther |
1 |
1.100 |
- |
- |
P |
PTHR11022 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X1649 |
|
11 | 10.900 |
|
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