powered by:
Protein Alignment PGRP-SC2 and Pglyrp2
DIOPT Version :9
Sequence 1: | NP_610410.1 |
Gene: | PGRP-SC2 / 35862 |
FlyBaseID: | FBgn0043575 |
Length: | 184 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_038935975.1 |
Gene: | Pglyrp2 / 299567 |
RGDID: | 1359183 |
Length: | 522 |
Species: | Rattus norvegicus |
Alignment Length: | 193 |
Identity: | 69/193 - (35%) |
Similarity: | 108/193 - (55%) |
Gaps: | 14/193 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MANKALILLAVLFC---AQAVLGVTII-SKSEWGGRSATS-KTSLANYLSYAVIHHTAGNY---- 56
|:.|.|..:|.... .:|.||...| .:..||...... .|.|...|....:||| |
Rat 328 MSQKQLAQVATFATKEFTEAFLGCPAIHPRCRWGAAPYRGHPTPLRLPLGLLYVHHT---YVPAP 389
Fly 57 -CSTKAACITQLQNIQAYHMDSLGWADIGYNFLIGGDGNVYEGRGWNVMGAHATNWNSKSIGISF 120
|:|..:|...::::|.:|.:..|||||||:|::|.||.||:||||:.:|||...:||:..|::|
Rat 390 PCTTFQSCAADMRSMQRFHQNVRGWADIGYSFVVGSDGYVYQGRGWHWVGAHTLGYNSRGFGVAF 454
Fly 121 LGNYNTNTLTSAQITAAKGLL-SDAVSRGQIVSGYILYGHRQVGSTECPGTNIWNEIRTWSNW 182
:|||..:..:.|.:...:.:| |.|:..|.:...|.|:||||:|.|:|||..::|.:|||.::
Rat 455 VGNYTGSLPSEAALNTVRDVLPSCAIRAGLLRPDYKLFGHRQLGKTDCPGNALFNLLRTWPHF 517
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-SC2 | NP_610410.1 |
PGRP |
21..162 |
CDD:128941 |
52/148 (35%) |
Pglyrp2 | XP_038935975.1 |
PGRP |
352..497 |
CDD:128941 |
52/147 (35%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166345859 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1110472at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000842 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_101717 |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
5 | 4.750 |
|
Return to query results.
Submit another query.