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Protein Alignment PGRP-SC2 and Pglyrp3
DIOPT Version :9
Sequence 1: | NP_610410.1 |
Gene: | PGRP-SC2 / 35862 |
FlyBaseID: | FBgn0043575 |
Length: | 184 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006501534.1 |
Gene: | Pglyrp3 / 242100 |
MGIID: | 2685266 |
Length: | 359 |
Species: | Mus musculus |
Alignment Length: | 161 |
Identity: | 59/161 - (36%) |
Similarity: | 97/161 - (60%) |
Gaps: | 1/161 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 23 IISKSEWGGRSATSKTSLANYLSYAVIHHTAGNYCSTKAACITQLQNIQAYHMDSLGWADIGYNF 87
|..:|.|..|. |....:.....:.:|.||||..|:..|.|:.::::.|::|:|:..:.||.|:|
Mouse 199 ITPRSAWEARE-THCPQMNLPAKFVIIIHTAGKSCNESADCLVRVRDTQSFHIDNQDFCDIAYHF 262
Fly 88 LIGGDGNVYEGRGWNVMGAHATNWNSKSIGISFLGNYNTNTLTSAQITAAKGLLSDAVSRGQIVS 152
|:|.||.||||.|||:.|:|...:|..::||:|:||:.......|.:.||:.|:..||::|.:.|
Mouse 263 LVGQDGEVYEGVGWNIEGSHTYGYNDIALGIAFMGNFVEKPPNEASLKAAQSLIQCAVAKGYLTS 327
Fly 153 GYILYGHRQVGSTECPGTNIWNEIRTWSNWK 183
.|:|.||..|.:...||..::|.|:||.::|
Mouse 328 NYLLMGHSDVSNILSPGQALYNIIKTWPHFK 358
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-SC2 | NP_610410.1 |
PGRP |
21..162 |
CDD:128941 |
51/138 (37%) |
Pglyrp3 | XP_006501534.1 |
PGRP |
40..172 |
CDD:128941 |
|
PGRP |
197..337 |
CDD:128941 |
51/138 (37%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C167842408 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5479 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm44042 |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_101717 |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X1649 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
|
7 | 6.600 |
|
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