DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGRP-SC2 and PGRP-LB

DIOPT Version :10

Sequence 1:NP_610410.1 Gene:PGRP-SC2 / 35862 FlyBaseID:FBgn0043575 Length:184 Species:Drosophila melanogaster
Sequence 2:XP_061504293.1 Gene:PGRP-LB / 1281956 VectorBaseID:AGAMI1_002833 Length:205 Species:Anopheles gambiae


Alignment Length:182 Identity:68/182 - (37%)
Similarity:101/182 - (55%) Gaps:7/182 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ALILLAVLFCAQAVLGVTIISKSEWGGRSATSKTSLANYLSYAVIHHTAGNY----CSTKAACIT 65
            |..|..|...::|...|..:::..|...........|..:.|.:|||   :|    |.....||.
Mosquito    15 AFTLFYVAVDSKACDSVPYVTRDFWSALPPKRIEHFAGPIPYVIIHH---SYRPAACYNGLQCIA 76

  Fly    66 QLQNIQAYHMDSLGWADIGYNFLIGGDGNVYEGRGWNVMGAHATNWNSKSIGISFLGNYNTNTLT 130
            .:|::|..|.|...|.||||:|.:||||.||:|||:||:||||..:|::|:||..:|::..:...
Mosquito    77 AMQSMQKMHQDERQWNDIGYSFAVGGDGRVYQGRGFNVIGAHAPRYNNRSVGICLIGDWVADLPP 141

  Fly   131 SAQITAAKGLLSDAVSRGQIVSGYILYGHRQVGSTECPGTNIWNEIRTWSNW 182
            ...:|||:.|:...|..|.|...|.|.|||||.:|||||..::.||:||.::
Mosquito   142 KNMLTAAQNLIEYGVRNGLIAKNYTLLGHRQVRTTECPGDRLFEEIKTWPHF 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-SC2NP_610410.1 PGRP 21..162 CDD:128941 53/144 (37%)
PGRP-LBXP_061504293.1 None

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