DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGRP-SC2 and LOC1271702

DIOPT Version :10

Sequence 1:NP_610410.1 Gene:PGRP-SC2 / 35862 FlyBaseID:FBgn0043575 Length:184 Species:Drosophila melanogaster
Sequence 2:XP_310547.4 Gene:LOC1271702 / 1271702 VectorBaseID:AGAMI1_004268 Length:200 Species:Anopheles gambiae


Alignment Length:162 Identity:64/162 - (39%)
Similarity:93/162 - (57%) Gaps:1/162 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 IISKSEWGGRSATSKTSLANYLSYAVIHHTAGNYCSTKAACITQLQNIQAYHMDSLGWADIGYNF 87
            |:.::.||...:.:.|.....::..::|||.|..|:|.|.|...:.|||.||.....|:||||||
Mosquito    39 IVKRAAWGAAKSKNVTYQLKPVANVIVHHTTGERCATVATCKEMVANIQTYHQTDNRWSDIGYNF 103

  Fly    88 LIGGDGNVYEGRGWNVMGAHATNWNSKSIGISFLGNYNTNTLTSAQITAAKGLLSDAVSRGQIVS 152
            ||.|. |||||.||:.||||...:|.||||::||||::....|...:.....||...|..|::..
Mosquito   104 LISGQ-NVYEGIGWHRMGAHLRGYNDKSIGVAFLGNFDQERPTPRSLNLLARLLQCGVELGELAD 167

  Fly   153 GYILYGHRQVGSTECPGTNIWNEIRTWSNWKA 184
            .|.|||.||:.||..||..::.:::...:|:|
Mosquito   168 DYRLYGARQLQSTNSPGRYLYAKLQELDHWQA 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-SC2NP_610410.1 PGRP 21..162 CDD:128941 57/138 (41%)
LOC1271702XP_310547.4 PGRP 37..177 CDD:128941 57/138 (41%)

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