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Protein Alignment PGRP-SC2 and PGLYRP2
DIOPT Version :9
Sequence 1: | NP_610410.1 |
Gene: | PGRP-SC2 / 35862 |
FlyBaseID: | FBgn0043575 |
Length: | 184 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001350475.1 |
Gene: | PGLYRP2 / 114770 |
HGNCID: | 30013 |
Length: | 634 |
Species: | Homo sapiens |
Alignment Length: | 177 |
Identity: | 65/177 - (36%) |
Similarity: | 96/177 - (54%) |
Gaps: | 11/177 - (6%) |
- Green bases have known domain annotations that are detailed below.
Fly 16 QAVLGVTII-SKSEWGGRSATSKTSLANY-LSYAVIHHTAGNY-----CSTKAACITQLQNIQAY 73
:|.||...| .:..||......:..|... |.:..:||| | |:....|...::::|.|
Human 374 EAFLGCPAIHPRCRWGAAPYRGRPKLLQLPLGFLYVHHT---YVPAPPCTDFTRCAANMRSMQRY 435
Fly 74 HMDSLGWADIGYNFLIGGDGNVYEGRGWNVMGAHATNWNSKSIGISFLGNYNTNTLTSAQITAAK 138
|.|:.||.||||:|::|.||.|||||||:.:|||....||:..|::.:|||.....|.|.:...:
Human 436 HQDTQGWGDIGYSFVVGSDGYVYEGRGWHWVGAHTLGHNSRGFGVAIVGNYTAALPTEAALRTVR 500
Fly 139 GLL-SDAVSRGQIVSGYILYGHRQVGSTECPGTNIWNEIRTWSNWKA 184
..| |.||..|.:...|.|.||||:..|:|||..:::.:|||.::.|
Human 501 DTLPSCAVRAGLLRPDYALLGHRQLVRTDCPGDALFDLLRTWPHFTA 547
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-SC2 | NP_610410.1 |
PGRP |
21..162 |
CDD:128941 |
53/148 (36%) |
PGLYRP2 | NP_001350475.1 |
PGRP |
380..525 |
CDD:128941 |
53/147 (36%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C165152351 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1110472at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000842 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_101717 |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
User_Submission |
0 | 0.000 |
Not matched by this tool. |
|
5 | 4.750 |
|
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