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Protein Alignment PGRP-SC1b and Pglyrp1
DIOPT Version :9
Sequence 1: | NP_001286209.1 |
Gene: | PGRP-SC1b / 35861 |
FlyBaseID: | FBgn0033327 |
Length: | 185 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_445825.1 |
Gene: | Pglyrp1 / 84387 |
RGDID: | 621429 |
Length: | 183 |
Species: | Rattus norvegicus |
Alignment Length: | 162 |
Identity: | 69/162 - (42%) |
Similarity: | 95/162 - (58%) |
Gaps: | 1/162 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 23 YVVSKAEWGGRGAKWTVGLGNYLSYAIIHHTAGSYCETRAQCNAVLQSVQNYHMDSLGWPDIGYN 87
:||.::||....::.:.||...:.|.:|.|||||:|.:...|....::||.|.|..|||.|:.||
Rat 20 FVVPRSEWKALPSECSKGLKKPVRYVVISHTAGSFCSSPDSCEQQARNVQLYQMKQLGWCDVAYN 84
Fly 88 FLIGGDGNVYEGRGWNNMGAHAAE-WNPYSIGISFLGNYNWDTLEPNMISAAQQLLNDAVNRGQL 151
||||.||:|||||||...|.|... |||.||||:|:|:|:........:.||..||...|:.|.|
Rat 85 FLIGEDGHVYEGRGWTIKGDHTGPIWNPMSIGITFMGDYSHRVPAKRALRAALNLLKCGVSEGFL 149
Fly 152 SSGYILYGHRQVSATECPGTHIWNEIRGWSHW 183
.|.|.:.|||.|.:|..||..::..|:.|.|:
Rat 150 RSNYEVKGHRDVQSTLSPGDQLYEIIQSWDHY 181
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-SC1b | NP_001286209.1 |
PGRP |
22..163 |
CDD:128941 |
62/140 (44%) |
Pglyrp1 | NP_445825.1 |
PGRP |
21..161 |
CDD:128941 |
62/139 (45%) |
Information from Original Tools:
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