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Protein Alignment PGRP-SC1b and pglyrp1-like.1
DIOPT Version :9
Sequence 1: | NP_001286209.1 |
Gene: | PGRP-SC1b / 35861 |
FlyBaseID: | FBgn0033327 |
Length: | 185 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001025626.1 |
Gene: | pglyrp1-like.1 / 595014 |
XenbaseID: | XB-GENE-5778936 |
Length: | 182 |
Species: | Xenopus tropicalis |
Alignment Length: | 169 |
Identity: | 80/169 - (47%) |
Similarity: | 111/169 - (65%) |
Gaps: | 5/169 - (2%) |
- Green bases have known domain annotations that are detailed below.
Fly 18 MAQGV-YVVSKAEWGGRGAKWTVGLGNYLSYAIIHHTAGSYCETRAQCNAVLQSVQNYHMDSLGW 81
:|||. .::|::.|||..:|....|...:.|.|||||||:.|.:.:.|.|..:::||:||.|.||
Frog 14 LAQGCPKIISRSSWGGVPSKCQAKLPRSVKYVIIHHTAGASCNSESACKAQARNIQNFHMKSNGW 78
Fly 82 PDIGYNFLIGGDGNVYEGRGWNNMGAHAAEWNPYSIGISFLGNYNWDTLEPNMIS--AAQQLLND 144
.|.|||||||.||.|||||||..:||||..:|..||||||:|.:. ...||..: ||:.|::.
Frog 79 CDTGYNFLIGEDGQVYEGRGWETVGAHAKNYNFNSIGISFMGTFT--NRAPNTAAQKAAKDLISC 141
Fly 145 AVNRGQLSSGYILYGHRQVSATECPGTHIWNEIRGWSHW 183
.|.:..::|.|.|.|||.|||||||||:::|.|:.|.::
Frog 142 GVAKKVINSDYTLKGHRDVSATECPGTNLYNLIKNWPNF 180
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-SC1b | NP_001286209.1 |
PGRP |
22..163 |
CDD:128941 |
65/143 (45%) |
pglyrp1-like.1 | NP_001025626.1 |
PGRP |
19..160 |
CDD:128941 |
65/142 (46%) |
Information from Original Tools:
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