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Protein Alignment PGRP-SC1b and pglyrp6
DIOPT Version :9
Sequence 1: | NP_001286209.1 |
Gene: | PGRP-SC1b / 35861 |
FlyBaseID: | FBgn0033327 |
Length: | 185 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001038687.2 |
Gene: | pglyrp6 / 571817 |
ZFINID: | ZDB-GENE-071227-2 |
Length: | 498 |
Species: | Danio rerio |
Alignment Length: | 170 |
Identity: | 73/170 - (42%) |
Similarity: | 101/170 - (59%) |
Gaps: | 16/170 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 24 VVSKAEWGGRGAKWTVGLGNYLS----YAIIHHT--AGSYCETRAQCNAVLQSVQNYHMDSLGWP 82
::::::| ||...:|..:||| |..|||| ....|.|..||.|.::|:|.||..|.||.
Zfish 330 IITRSQW---GAASYIGSPSYLSLPVRYLFIHHTYQPSKPCTTFEQCAAEMRSMQRYHQQSNGWS 391
Fly 83 DIGYNFLIGGDGNVYEGRGWNNMGAHAAEWNPYSIGISFLGNYNWDTLEPNMISAAQQLLND--- 144
||||:|:.|.|||:|||||||.:|||...:|....|:.|:|:|. .||..: ||...:..|
Zfish 392 DIGYSFVAGSDGNLYEGRGWNWVGAHTYGYNSIGYGVCFIGDYT-STLPAS--SAMNMVRYDFTY 453
Fly 145 -AVNRGQLSSGYILYGHRQVSATECPGTHIWNEIRGWSHW 183
|.|.|:||..|.||||||.:||||||..::.:|:.|..:
Zfish 454 CATNGGRLSKSYSLYGHRQAAATECPGNTLYRQIQTWERY 493
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-SC1b | NP_001286209.1 |
PGRP |
22..163 |
CDD:128941 |
64/148 (43%) |
pglyrp6 | NP_001038687.2 |
PGRP |
328..472 |
CDD:128941 |
63/147 (43%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C170586837 |
Domainoid |
1 |
1.000 |
129 |
1.000 |
Domainoid score |
I5198 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000842 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_101717 |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
6 | 5.740 |
|
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