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Protein Alignment PGRP-SC1b and PGRP-SD
DIOPT Version :9
Sequence 1: | NP_001286209.1 |
Gene: | PGRP-SC1b / 35861 |
FlyBaseID: | FBgn0033327 |
Length: | 185 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_648145.1 |
Gene: | PGRP-SD / 38858 |
FlyBaseID: | FBgn0035806 |
Length: | 186 |
Species: | Drosophila melanogaster |
Alignment Length: | 182 |
Identity: | 72/182 - (39%) |
Similarity: | 105/182 - (57%) |
Gaps: | 4/182 - (2%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 VALLLAVLVCSQYMAQG-VYVVSKAEWGGRGAKWTV-GLGNYLSYAIIHHTAGSYCETRAQCNAV 67
:.||:..| :....|| |.:|::|||..:.....: .:...|..|:|.||||..|.....|:..
Fly 4 IGLLIVGL--TAIAVQGEVPIVTRAEWNAKPPNGAIDSMETPLPRAVIAHTAGGACADDVTCSQH 66
Fly 68 LQSVQNYHMDSLGWPDIGYNFLIGGDGNVYEGRGWNNMGAHAAEWNPYSIGISFLGNYNWDTLEP 132
:|::||:.|....:.||||::||||:|.|||||..:..||.|...|..|:||:|:||:.......
Fly 67 MQNLQNFQMSKQKFSDIGYHYLIGGNGKVYEGRSPSQRGAFAGPNNDGSLGIAFIGNFEERAPNK 131
Fly 133 NMISAAQQLLNDAVNRGQLSSGYILYGHRQVSATECPGTHIWNEIRGWSHWS 184
..:.||::||..||.:.||..||.|.||||||||:.||..::..|:.|.:||
Fly 132 EALDAAKELLEQAVKQAQLVEGYKLLGHRQVSATKSPGEALYALIQQWPNWS 183
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-SC1b | NP_001286209.1 |
PGRP |
22..163 |
CDD:128941 |
56/141 (40%) |
PGRP-SD | NP_648145.1 |
PGRP |
20..162 |
CDD:128941 |
56/141 (40%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C45440257 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000842 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_101717 |
Panther |
1 |
1.100 |
- |
- |
P |
PTHR11022 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
5 | 4.840 |
|
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