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Protein Alignment PGRP-SC1b and Pglyrp1
DIOPT Version :9
Sequence 1: | NP_001286209.1 |
Gene: | PGRP-SC1b / 35861 |
FlyBaseID: | FBgn0033327 |
Length: | 185 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_033428.1 |
Gene: | Pglyrp1 / 21946 |
MGIID: | 1345092 |
Length: | 182 |
Species: | Mus musculus |
Alignment Length: | 180 |
Identity: | 75/180 - (41%) |
Similarity: | 105/180 - (58%) |
Gaps: | 8/180 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 VALLLAVLVCSQYMAQGVYVVSKAEWGGRGAKWTVGLGNYLSYAIIHHTAGSYCETRAQCNAVLQ 69
:|||.....|| ::|.::||....::.:..||:.:.|.:|.|||||:|.:...|....:
Mouse 8 LALLGLATSCS-------FIVPRSEWRALPSECSSRLGHPVRYVVISHTAGSFCNSPDSCEQQAR 65
Fly 70 SVQNYHMDSLGWPDIGYNFLIGGDGNVYEGRGWNNMGAHAAE-WNPYSIGISFLGNYNWDTLEPN 133
:||:||.:.|||.|:.||||||.||:||||||||..|.|... |||.||||:|:||:........
Mouse 66 NVQHYHKNELGWCDVAYNFLIGEDGHVYEGRGWNIKGDHTGPIWNPMSIGITFMGNFMDRVPAKR 130
Fly 134 MISAAQQLLNDAVNRGQLSSGYILYGHRQVSATECPGTHIWNEIRGWSHW 183
.:.||..||...|:||.|.|.|.:.|||.|.:|..||..::..|:.|.|:
Mouse 131 ALRAALNLLECGVSRGFLRSNYEVKGHRDVQSTLSPGDQLYQVIQSWEHY 180
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-SC1b | NP_001286209.1 |
PGRP |
22..163 |
CDD:128941 |
63/141 (45%) |
Pglyrp1 | NP_033428.1 |
PGRP |
20..160 |
CDD:128941 |
63/139 (45%) |
Information from Original Tools:
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