DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14743 and AT5G17850

DIOPT Version :10

Sequence 1:NP_610408.2 Gene:CG14743 / 35860 FlyBaseID:FBgn0033326 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_197287.1 Gene:AT5G17850 / 831653 AraportID:AT5G17850 Length:559 Species:Arabidopsis thaliana


Alignment Length:636 Identity:127/636 - (19%)
Similarity:233/636 - (36%) Gaps:196/636 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 CLAVMHF-SYLHRCEMATKIDDCKYITNFFNYYVMMYCSFKIDNKITEIVVMLLFALIYCFFLCI 89
            |.|:.|| .|..:|.....||.|. ...||:|...:||:|:....:.:.::.|...|:  |:|  
plant    46 CSALKHFHDYKSKCAYLKSIDPCA-SQGFFDYLSFLYCNFEGFPILGQFLLFLWLLLL--FYL-- 105

  Fly    90 LYEGVNSYFAPTLKIAALKMRINEYMAGVVLVGVANSTPDLLVNLSPVRMEGL-TFNIAMANALT 153
            |....:.||..:|:..:..:.::..:|||.|:.:.|..|||..:|.....|.. |:::.:.   |
plant   106 LGHTASEYFCSSLESLSKLLNLSPTVAGVTLLSLGNGAPDLFASLVSFMGESKGTYDVGLN---T 167

  Fly   154 IICLSGGAVCFI----------RPFRMNGHSIFRDLLF---------LLLIIELVRFFMNDTALA 199
            ::..||...|.:          |..|:...:..||:.|         |:|:...:.|        
plant   168 VVGGSGFVTCVVVGIISISLHKRRVRIERAAFIRDICFFCAAIGSLALILVYGKINF-------- 224

  Fly   200 PWIKGAI-LLSIYPIYLLINIVDLILLRYAI---RKLRADIEVLRQSPSSREHDLILTEKIVRLN 260
             |  ||: ..|:|.:|     |..::|.:..   :...:|:|.:.:..|       |:|.|::.:
plant   225 -W--GALGFCSLYAVY-----VAFVVLSWRFGGDQGAESDLESIHKRGS-------LSEPILQRD 274

  Fly   261 NLQQ------DDEIQILESKLYRKRTYNAGFFVTPKPLIHHKEVDVETNRRILHSKANPKNLFLF 319
            .|::      :.|.||::                          |.:.::|..:.|         
plant   275 GLEEIEDGVVNGEHQIVD--------------------------DDDDHQRYYYWK--------- 304

  Fly   320 SEFLQAINPIDSEGWYLSGTCARILQILKAPVTLMLHLVVPLVDYQLVKHGWSKMLNCLQIVLTP 384
                                 ..::..:..|:.|...|.:|:|.    :..|||.|....:...|
plant   305 ---------------------RLVIWAITLPLNLPRILTIPVVS----EDKWSKPLAVASVTFAP 344

  Fly   385 FVIFALVETMLVHKYAEWYYVP-QFRMAIWSL---LVTMPLAIVVFLHSRTDIPP---------- 435
            .::..|         ..|...| .|...:..|   |:.:.|..:....::...||          
plant   345 VLLSFL---------WNWKRKPTSFEAGVVYLIGCLIGIALGFIAGATTKKLTPPKKWLLPWLAG 400

  Fly   436 -FYHSSYCALTISTVIIFFWICAWEMDALISIIGVVFDLAPSYMSITFNSVSAATADLIAYAHLA 499
             |..|          :.:.:|.|.|:.||::.:|.:|.::||.:.:|..:...:..|||....:|
plant   401 GFVMS----------MTWSYISAQELVALLTSLGYIFGVSPSILGLTVLAWGNSIGDLITNLTMA 455

  Fly   500 KHGYGKMAFGAIIG---GSVYSLAVNVGIELVLQKKLNSRGQVVLYGDDGVTIYIF-LVITITTT 560
            .|...:.|..|:.|   |.:::....:||.||                 |.....: |.|.|.|.
plant   456 LHDGNEGAQVAVSGCYAGPIFNTLFALGISLV-----------------GCAWEAYPLSIVIKTD 503

  Fly   561 LWWCLTFNFVARRSAGLFMWSLFVLF---------------LVYTTAIELQ 596
            .....:..|:.   ||| :||..|||               ::|..::.|:
plant   504 PRLLESLGFLV---AGL-VWSFLVLFSNRMRLGGVMGIGLLVIYLASLSLR 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14743NP_610408.2 ECM27 106..>221 CDD:440296 29/135 (21%)
PLN03151 <337..529 CDD:215604 43/209 (21%)
Na_Ca_ex 450..591 CDD:426387 38/159 (24%)
AT5G17850NP_197287.1 PLN03151 34..556 CDD:215604 127/636 (20%)

Return to query results.
Submit another query.