DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14743 and slc24a6a

DIOPT Version :9

Sequence 1:NP_610408.2 Gene:CG14743 / 35860 FlyBaseID:FBgn0033326 Length:611 Species:Drosophila melanogaster
Sequence 2:XP_009289475.1 Gene:slc24a6a / 561209 ZFINID:ZDB-GENE-100922-39 Length:639 Species:Danio rerio


Alignment Length:626 Identity:118/626 - (18%)
Similarity:215/626 - (34%) Gaps:200/626 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 VVMLLFALIYCFFLCILYEGVNSYFAPTLKIAALKMRINEYMAGVVLVGVANSTPDLLVNLSPVR 138
            :::.:|..:|.|:...:...|  :|.|:|:.....:.::|.:||...:...:|.|:|..:|..|.
Zfish   107 ILLHVFCAVYMFYALAIVCDV--FFVPSLEKICENLHLSEDVAGATFMAAGSSAPELFTSLIGVF 169

  Fly   139 ME------GLTFNIAMANALTIICLSGGAVCFI---RPFRMNGHSIFRDLLFLLL-IIELVRFFM 193
            :.      |.....|:.|.|.||     .||.|   :...:....:|||.:|.:| ::.|:....
Zfish   170 ITKGDLGVGTIVGSAVFNILVII-----GVCGIFAGQTITLTWWPLFRDSIFYILSVLALILIIY 229

  Fly   194 NDTALAPWIKGAILLSIYPIYLLI-----NIVDLILLRYAI-------RKLRADIEVLRQSPSSR 246
            ::..:  |.:..||:|:|.:|:||     .|...:..|:.|       ..||.|:.|...||.. 
Zfish   230 DEKVI--WWETIILISMYGVYILIMKFNSQIWGWVEQRFGIPGQPCLVSSLRRDVSVGEASPHC- 291

  Fly   247 EHDLILTEKIVRLNNLQQD------DEIQILESKLYRKRTYNAGFFVTP------------KPLI 293
            :..:||.:|  ..|...||      ||:..|....:.....:....:||            :.||
Zfish   292 DTSMILLKK--GQNAGGQDSPVVMVDELMSLHPHQFSFSEASLRVMITPHFSPRTRLSMAGRMLI 354

  Fly   294 HHKEVDVETNRRILHSKANPKNLFLFSEFLQAINPIDSEG------------------WYL---- 336
            ..::       |::.::                :|.||.|                  |.|    
Zfish   355 TERQ-------RLIRNR----------------SPGDSSGSGAGDTPGQDGPGMEAVPWGLENGG 396

  Fly   337 -----------------SGTCARILQILKA------------------PVTLMLHLVVPLVDYQL 366
                             .|...|:..|...                  |.|      ||...::.
Zfish   397 ALESETQPLEEPRRRSQGGELERVADIEDTQPKDDEEDEEEADEEPFRPFT------VPEGRWEQ 455

  Fly   367 VKHGWSKMLNCLQIVLTPFVIFALVETMLVHKYAEWYYVPQFRMAIWSLLVTMPLAIVVFLHSRT 431
            .|..:|..|:||        ::..|...::.::..|:.|......:|                  
Zfish   456 AKWMFSWPLSCL--------LYYTVPNCVLPRWERWFMVTFVASTLW------------------ 494

  Fly   432 DIPPFYHSSYCALTISTVIIFFWICAWEMDALISIIGVVFDLAPSYMSITFNSVSAATADLIAYA 496
                             :.:|.::..|    :::||....|:....|.|||.:...:..|.:|..
Zfish   495 -----------------IAVFSYLMVW----MVTIISFTLDIPDVVMGITFLAAGTSVPDCMASL 538

  Fly   497 HLAKHGYGKMAFGAIIGGSVYSLAVNVGIELVLQKKLNSRGQVVLYGDDGVTIY--------IFL 553
            .:|:.|.|.||....||.:::.:.:.:|....|:..:...|..|.....|: :|        :||
Zfish   539 IVARQGMGDMAVSNSIGSNIFDILLGLGFPWALRTLVVDYGSTVSINSKGL-VYSVILLLASVFL 602

  Fly   554 VITITTTLWWCLTFNFVARRSAGLFMWSLFVLFLVYTTAIE 594
            .:.......|.|.      |..||.:..|:.:||:.:...|
Zfish   603 TVLSVHLNHWRLD------RRLGLGLMFLYAIFLLCSICFE 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14743NP_610408.2 Na_Ca_ex 77..220 CDD:279963 38/157 (24%)
Na_Ca_ex 450..591 CDD:279963 34/148 (23%)
slc24a6aXP_009289475.1 Na_Ca_ex <85..637 CDD:332332 117/624 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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