DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14743 and Slc24a4

DIOPT Version :10

Sequence 1:NP_610408.2 Gene:CG14743 / 35860 FlyBaseID:FBgn0033326 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_001388274.1 Gene:Slc24a4 / 314396 RGDID:1305926 Length:622 Species:Rattus norvegicus


Alignment Length:600 Identity:125/600 - (20%)
Similarity:232/600 - (38%) Gaps:172/600 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 VVMLLFALIYCFF-LCILYEGVNSYFAPTLKIAALKMRINEYMAGVVLVGVANSTPDLLVNLSPV 137
            |::.:...:|.|: |.|:   .:.:|.|:|:....|:.::|.:||...:...:|||:|..::..|
  Rat   100 VLLHILGALYMFYALAIV---CDDFFVPSLEKICEKLHLSEDVAGATFMAAGSSTPELFASVIGV 161

  Fly   138 RME------GLTFNIAMANALTIICLSGGAVCFI---RPFRMNGHSIFRD-LLFLLLIIELVRFF 192
            .:.      |.....|:.|   |:|:.|  ||.:   :..|:...::.|| :.:.|.:|.|:.|.
  Rat   162 FITHGDVGVGTIVGSAVFN---ILCIIG--VCGLFAGQVVRLTWWAVCRDSVYYTLSVIVLIAFI 221

  Fly   193 MNDTALAPWIKGAILLSIYPIYLLINIVDLILLRYAIRKLRA---------------DI------ 236
            .::..:  |.:|.||:.:|..|:||...::.:..:...|.::               |:      
  Rat   222 YDEEIV--WWEGLILIILYVFYILIMKYNMKMQTFFTTKQKSIANGNPVSNELEDGNDLYDGSFD 284

  Fly   237 -------------------------EVLRQSPSSREHD-----LILTEKIVRLNNLQQDDEIQIL 271
                                     |:|..||......     :::|.|......|:....|.|.
  Rat   285 DPSVPLLGQVKEKPPYGKSPVVMVDEILSSSPPKFTFPEAGLRIMITNKFGPRTRLRMASRIIIN 349

  Fly   272 ESKLYRKRTYNAGFFVTPKPLIHHKEVDVETNRRILHSKANPKNLFLFSEFLQAINPIDSEGWYL 336
            |    |:|..|:...|..|||.:.:..::|.....:.:..:|:                 :|   
  Rat   350 E----RQRLINSANGVNSKPLQNGRHENMENGNVPVENPEDPQ-----------------QG--- 390

  Fly   337 SGTCARILQILKAPVTLMLHLVVPLVDYQLVKHGWSKMLNCLQIVLTPFVIFALVETMLVHKYAE 401
                    |..:.|..      .|..:.:.|:          .:.|:|   |::.|..  ...|:
  Rat   391 --------QEQQPPPQ------PPPPEPESVE----------TVFLSP---FSMPEAK--GDKAK 426

  Fly   402 WYYVPQFRMAIWSLL----VTMPLAIVVFLHSRTDIPPFYHSSYCALTISTVIIFFWICAWEMDA 462
            |.:.       |.|:    ||:|..      |:.....|:..::...|: .:.:|.::..|    
  Rat   427 WVFT-------WPLIFLLCVTIPNC------SKPRWEKFFMVTFITATL-WIAVFSYLMVW---- 473

  Fly   463 LISIIGVVFDLAPSYMSITFNSVSAATADLIAYAHLAKHGYGKMAFGAIIGGSVYSLAVNVGIEL 527
            |::|||....:....|.|||.:...:..|.:|...:|:.|.|.||....||.:|:.:.|.:||..
  Rat   474 LVTIIGYTLGIPDVIMGITFLAAGTSVPDCMASLIVARQGLGDMAVSNTIGSNVFDILVGLGIPW 538

  Fly   528 VLQK---------KLNSRG----QVVLYGDDGVTIYIFLVITITTTLWWCLTFNFVARRSAGLFM 579
            .||.         |:||||    .|:|.|...:|:   |.|.:..   |.|.      |..|:::
  Rat   539 GLQTMVINYGSTVKINSRGLVYSVVLLLGSVALTV---LGIHLNK---WRLD------RKLGIYV 591

  Fly   580 WSLFVLFLVYTTAIE 594
            ..|:.:||.::..||
  Rat   592 LVLYAVFLCFSIMIE 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14743NP_610408.2 ECM27 106..>221 CDD:440296 32/124 (26%)
PLN03151 <337..529 CDD:215604 41/195 (21%)
Na_Ca_ex 450..591 CDD:426387 43/153 (28%)
Slc24a4NP_001388274.1 2A1904 <80..606 CDD:273344 123/598 (21%)

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