DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14743 and slc24a4b

DIOPT Version :9

Sequence 1:NP_610408.2 Gene:CG14743 / 35860 FlyBaseID:FBgn0033326 Length:611 Species:Drosophila melanogaster
Sequence 2:XP_002665845.2 Gene:slc24a4b / 100334346 ZFINID:ZDB-GENE-081031-75 Length:636 Species:Danio rerio


Alignment Length:561 Identity:114/561 - (20%)
Similarity:207/561 - (36%) Gaps:132/561 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 VVMLLFALIYCFF-LCILYEGVNSYFAPTLKIAALKMRINEYMAGVVLVGVANSTPDLLVNLSPV 137
            |::.:.|.:|.|. |.|:   .:.||..:|:....|:.::|.:||...:...:|.|:|..::..|
Zfish   153 VLLHIIAALYMFLALAIV---CDDYFVTSLEKICEKLNLSEDVAGATFMAAGSSAPELFASVIGV 214

  Fly   138 RME------GLTFNIAMANALTIICLSGGAVCFI---RPFRMNGHSIFRDLLFLLLIIELVRFFM 193
            .:.      |.....|:.|   |:|:.|  ||.|   :...:...::|||..|.:|.:..:..|:
Zfish   215 FITHGDVGVGTIVGSAVFN---ILCIIG--VCGIFAGQVVLLTWWAVFRDSFFYILSVVALIVFI 274

  Fly   194 NDTALAPWIKGAILLSIYPIYLLINIVDLILLRYAIRKLRADIEVLRQSPSSREHDLILTEKIVR 258
            .|..:. |.:..:|:.:|..|:||...:..|.::..||...::.....:..|...| :.|.||..
Zfish   275 YDEKIV-WWESLVLVVMYACYILIMKFNSRLQKFFTRKGNKNVANGNAAAGSELED-VKTSKIYS 337

  Fly   259 LNNLQQDDEIQILESKLYRKRTYNAGFFVT----PKPLIHHKEVDVETNRRILHSKAN------- 312
            ..::...|||.......||.........||    ||..:......:.|.|:.|...||       
Zfish   338 RGSVVMVDEIINASPPNYRFPEAGLRVMVTNHFGPKTRLRMASRLIITERQRLVQSANGVETAVV 402

  Fly   313 -----------PKNLFLFSEFLQAINPIDSEGWYLSGTCARILQILKAPVTLMLHLVVPLVDYQL 366
                       |::.....:..:...|....    .|...|...::..|:.|:|...:|    ..
Zfish   403 DGKPDIENGNVPEDKSTEEKESELTTPFRLP----DGCMNRTKWLISWPLLLILFFTIP----NC 459

  Fly   367 VKHGWSKMLNCLQIVLTPFVIFALVETMLVHKYAEWYYVPQFRMA-IWSLLVTMPLAIVVFLHSR 430
            .|..|.|                             |::..|.:: :|                 
Zfish   460 AKSRWEK-----------------------------YFMLSFILSTVW----------------- 478

  Fly   431 TDIPPFYHSSYCALTISTVIIFFWICAWEMDALISIIGVVFDLAPSYMSITFNSVSAATADLIAY 495
                              :.:|.:...|    :::|||....:....|.|||.:...:..|.||.
Zfish   479 ------------------IAVFSYFMVW----MVTIIGYTLGIPDVIMGITFLAAGTSVPDCIAS 521

  Fly   496 AHLAKHGYGKMAFGAIIGGSVYSLAVNVGIELVLQKKLNSRGQVVLYGDDGVTIYIFLVI-TITT 559
            ..:|:.|.|.||....||.:|:.:.|.:|:...||....:.|.||:....|:...:.|:: ::..
Zfish   522 LIVARQGLGDMAVSNTIGSNVFDILVGLGVPWALQTMAVNYGSVVMINSRGLLYSVVLLLGSVAL 586

  Fly   560 TL------WWCLTFNFVARRSAGLFMWSLFVLFLVYTTAIE 594
            |:      .|.|.|..      |:::..|:.:||.::..||
Zfish   587 TILGIHLNHWKLDFKL------GVYVLLLYAVFLCFSIMIE 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14743NP_610408.2 Na_Ca_ex 77..220 CDD:279963 38/152 (25%)
Na_Ca_ex 450..591 CDD:279963 37/147 (25%)
slc24a4bXP_002665845.2 TIGR00367 155..581 CDD:273039 103/511 (20%)
Na_Ca_ex 156..298 CDD:279963 37/150 (25%)
Na_Ca_ex 467..619 CDD:279963 40/196 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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