DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGRP-SC1a and pglyrp5

DIOPT Version :10

Sequence 1:NP_610407.1 Gene:PGRP-SC1a / 35859 FlyBaseID:FBgn0043576 Length:185 Species:Drosophila melanogaster
Sequence 2:NP_001037786.1 Gene:pglyrp5 / 553387 ZFINID:ZDB-GENE-050419-71 Length:238 Species:Danio rerio


Alignment Length:151 Identity:61/151 - (40%)
Similarity:86/151 - (56%) Gaps:0/151 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 VSKAEWGGRGAKWTVGLGNYLSYAIIHHTAGSYCETRAQCNAVLQSVQNYHMDSLGWPDIGYNFL 89
            ||:..|.....:....:.:.....|:||||..:|....:....|..:|..||...|:.|||||||
Zfish    71 VSRRGWDAVQPREMTQMESPAHTVIVHHTALRFCAHPRESVTELAHIQRMHMQERGFDDIGYNFL 135

  Fly    90 IGGDGNVYEGRGWNNMGAHAAEWNPYSIGISFLGNYNWDTLEPNMISAAQQLLNDAVNRGQLSSG 154
            |.|||.|||||||..:||||.|.|.||:||:|:||.|.|......:||..:||:..|..|.:...
Zfish   136 ISGDGTVYEGRGWGIVGAHAKEHNFYSVGIAFMGNLNADLPSSASLSALLRLLHIGVLHGHVRPN 200

  Fly   155 YILYGHRQVSATECPGTHIWN 175
            ::|.||:.|:.|.|||.::::
Zfish   201 FVLLGHKDVAKTACPGENLYS 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-SC1aNP_610407.1 PGRP 22..163 CDD:128941 56/137 (41%)
pglyrp5NP_001037786.1 PGRP 68..209 CDD:128941 56/137 (41%)

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