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Protein Alignment PGRP-SC1a and PGRP-SB2
DIOPT Version :9
Sequence 1: | NP_610407.1 |
Gene: | PGRP-SC1a / 35859 |
FlyBaseID: | FBgn0043576 |
Length: | 185 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001261970.1 |
Gene: | PGRP-SB2 / 39869 |
FlyBaseID: | FBgn0043577 |
Length: | 191 |
Species: | Drosophila melanogaster |
Alignment Length: | 188 |
Identity: | 64/188 - (34%) |
Similarity: | 94/188 - (50%) |
Gaps: | 31/188 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 LLLAVLVCSQYMAQGVYVVSKAEW-----GGRGAKWTVGLGNYLSYAIIHHTAGSYCETRAQCNA 66
|.||:::|...:|.| .:|.::.| ..|..:..|. :...|||||..:.|....||..
Fly 3 LQLALVLCGLTLALG-QIVPRSSWCPVPISPRMPRLMVP----VRLIIIHHTVTAPCFNPHQCQL 62
Fly 67 VLQSVQNYHMDSLGWPDIGYNFLIGGDGNVYEGRGWNNMGAHAAEWNPYSIGISFLGNY----NW 127
||:.::..|| ...:.||||||||||||.:|||.|:...|.||..:|..||||:|:||: ..
Fly 63 VLRQIRADHM-RRKFRDIGYNFLIGGDGRIYEGLGFGIRGEHAPRYNSQSIGIAFIGNFQNAPGC 126
Fly 128 DTLEPNMISAA---QQLLNDAVNRGQL-SSGYILYGH------RQVS--ATECPGTHI 173
....||..:|: .||... |.| :.|:.|.|: ::|: ||:..|.|:
Fly 127 PNPHPNRCAASPGFAQLFRG----GSLPNEGHCLSGNTPSQRAQKVAKLATKALGFHM 180
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-SC1a | NP_610407.1 |
PGRP |
22..163 |
CDD:128941 |
53/159 (33%) |
PGRP-SB2 | NP_001261970.1 |
PGRP |
18..>129 |
CDD:128941 |
43/115 (37%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C45440239 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1110472at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000842 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm26632 |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
P |
PTHR11022 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
6 | 5.950 |
|
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