powered by:
Protein Alignment PGRP-SC1a and Pglyrp3
DIOPT Version :9
Sequence 1: | NP_610407.1 |
Gene: | PGRP-SC1a / 35859 |
FlyBaseID: | FBgn0043576 |
Length: | 185 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006501534.1 |
Gene: | Pglyrp3 / 242100 |
MGIID: | 2685266 |
Length: | 359 |
Species: | Mus musculus |
Alignment Length: | 141 |
Identity: | 59/141 - (41%) |
Similarity: | 86/141 - (60%) |
Gaps: | 8/141 - (5%) |
- Green bases have known domain annotations that are detailed below.
Fly 47 YAIIHHTAGSYCETRAQCNAVLQSVQNYHMDSLGWPDIGYNFLIGGDGNVYEGRGWNNMGAHAAE 111
:.||.||||..|...|.|...::..|::|:|:..:.||.|:||:|.||.||||.|||..|:|...
Mouse 221 FVIIIHTAGKSCNESADCLVRVRDTQSFHIDNQDFCDIAYHFLVGQDGEVYEGVGWNIEGSHTYG 285
Fly 112 WNPYSIGISFLGNYNWDTLE--PN--MISAAQQLLNDAVNRGQLSSGYILYGHRQVSATECPGTH 172
:|..::||:|:||: :| || .:.|||.|:..||.:|.|:|.|:|.||..||....||..
Mouse 286 YNDIALGIAFMGNF----VEKPPNEASLKAAQSLIQCAVAKGYLTSNYLLMGHSDVSNILSPGQA 346
Fly 173 IWNEIRGWSHW 183
::|.|:.|.|:
Mouse 347 LYNIIKTWPHF 357
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-SC1a | NP_610407.1 |
PGRP |
22..163 |
CDD:128941 |
51/119 (43%) |
Pglyrp3 | XP_006501534.1 |
PGRP |
40..172 |
CDD:128941 |
|
PGRP |
197..337 |
CDD:128941 |
51/119 (43%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C167842406 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm44042 |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_101717 |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X1649 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
|
6 | 5.700 |
|
Return to query results.
Submit another query.