DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14744 and slc24a6a

DIOPT Version :9

Sequence 1:NP_001097232.2 Gene:CG14744 / 35858 FlyBaseID:FBgn0033324 Length:620 Species:Drosophila melanogaster
Sequence 2:XP_009289475.1 Gene:slc24a6a / 561209 ZFINID:ZDB-GENE-100922-39 Length:639 Species:Danio rerio


Alignment Length:625 Identity:138/625 - (22%)
Similarity:227/625 - (36%) Gaps:192/625 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 MLLFAFICVAFLWLMSFNIGTYFSPVLKIISLKLHMNEYLAGVTFLAFGNCSPEIIANLMPV--- 139
            :||..|..|...:.::.....:|.|.|:.|...||::|.:||.||:|.|:.:||:..:|:.|   
Zfish   107 ILLHVFCAVYMFYALAIVCDVFFVPSLEKICENLHLSEDVAGATFMAAGSSAPELFTSLIGVFIT 171

  Fly   140 RADAPIFTI---TVGNTLAII----LLSGGTVCFLRPFRMNGHSTLRDLLFLLLGVEVLRFVMIK 197
            :.|..:.||   .|.|.|.||    :.:|.|:      .:......||.:|.:|.|..| .::|.
Zfish   172 KGDLGVGTIVGSAVFNILVIIGVCGIFAGQTI------TLTWWPLFRDSIFYILSVLAL-ILIIY 229

  Fly   198 EGAVTLGEGIVLFLIYVVYVAI-----NIADLALLRY-------YIRKLRRE------------- 237
            :..|...|.|:|..:|.||:.|     .|......|:       .:..|||:             
Zfish   230 DEKVIWWETIILISMYGVYILIMKFNSQIWGWVEQRFGIPGQPCLVSSLRRDVSVGEASPHCDTS 294

  Fly   238 -------------------LDYLEGLTPPPITEINAKIRKLIS--WEEQDDIG------IKDTTK 275
                               :|.|..|.|...:...|.:|.:|:  :..:..:.      |.:..:
Zfish   295 MILLKKGQNAGGQDSPVVMVDELMSLHPHQFSFSEASLRVMITPHFSPRTRLSMAGRMLITERQR 359

  Fly   276 YRRSRDTGNHFSNMTSSGYFVTP----------------------------IPERRSEHVDYELN 312
            ..|:|..|    :.:.||...||                            .|.|||:  ..||.
Zfish   360 LIRNRSPG----DSSGSGAGDTPGQDGPGMEAVPWGLENGGALESETQPLEEPRRRSQ--GGELE 418

  Fly   313 RTALHDSENPKNLQLFTEFFQSLNPVDAEAWQLGGWSNRIYLIARCPLVFVLQLFIPVVDYEKIK 377
            |.|..:...||:.:      :.....|.|.::              |..      :|...:|:.|
Zfish   419 RVADIEDTQPKDDE------EDEEEADEEPFR--------------PFT------VPEGRWEQAK 457

  Fly   378 HGWSKLLNCTQIVTNPFVVITLVHSGVSSVYKTWHITLDFSISMWSPCLTVPLAIVIFLHSRTDV 442
            ..:|..|:|....|.|..|:                                             
Zfish   458 WMFSWPLSCLLYYTVPNCVL--------------------------------------------- 477

  Fly   443 PPSYHHLFIILTFFSSMVTLWLAV-TELEV-LSEIVGIVFNLSESFMAVTFEAVSNATPDIIANY 505
             |.:...|:: ||.:|  |||:|| :.|.| :..|:....::.:..|.:||.|...:.||.:|:.
Zfish   478 -PRWERWFMV-TFVAS--TLWIAVFSYLMVWMVTIISFTLDIPDVVMGITFLAAGTSVPDCMASL 538

  Fly   506 QLALQGYGRMAFAAIIGGPVFAILVSMSLAFIFNHRVREVGA----NS--WVYGDLGDNCYLFLV 564
            .:|.||.|.||.:..||..:|.||:.:...:.....|.:.|:    ||  .||..:.....:||.
Zfish   539 IVARQGMGDMAVSNSIGSNIFDILLGLGFPWALRTLVVDYGSTVSINSKGLVYSVILLLASVFLT 603

  Fly   565 ITIVTTMWWSVTFDFHARRSAGVFLWLVYLQFLLYAVCVE 604
            :..|....|.:.      |..|:.|..:|..|||.::|.|
Zfish   604 VLSVHLNHWRLD------RRLGLGLMFLYAIFLLCSICFE 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14744NP_001097232.2 Na_Ca_ex 79..221 CDD:279963 46/156 (29%)
Na_Ca_ex 450..601 CDD:279963 47/158 (30%)
slc24a6aXP_009289475.1 Na_Ca_ex <85..637 CDD:332332 137/623 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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