DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12376 and Slc24a2

DIOPT Version :9

Sequence 1:NP_610405.3 Gene:CG12376 / 35857 FlyBaseID:FBgn0033323 Length:617 Species:Drosophila melanogaster
Sequence 2:NP_113931.1 Gene:Slc24a2 / 84550 RGDID:628650 Length:670 Species:Rattus norvegicus


Alignment Length:592 Identity:129/592 - (21%)
Similarity:237/592 - (40%) Gaps:137/592 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 MGLCYEILVLLIHVCNKYYSPALKAVSRFLCMNEHVAGVTLLAFGNSSADLFSNLASV---NANV 140
            :|:.|..:.|.| ||::::.|:|..::..|.:::.|||.|.:|.|.|:.:||::|..|   ::||
  Rat   141 IGMIYMFIALAI-VCDEFFVPSLTVITEKLGISDDVAGATFMAAGGSAPELFTSLIGVFIAHSNV 204

  Fly   141 PVFANSLAAALFVSMVSGGLICYTSPFKMNA--YESVRDILFLIFGSMLLQYFLASSAHVPETSF 203
            .: ...:.:|:|..:...|:....|...:|.  :...||:.|.|...::|..|...:..:...|.
  Rat   205 GI-GTIVGSAVFNILFVIGMCALFSREILNLTWWPLFRDVSFYIVDLIMLIIFFLDNVIMWWESL 268

  Fly   204 IVM--FLVYIFYILVNVVDVYLIRRALKTTNAQIDALLVGEMTPEKRKRLSELERNQAIYTRDME 266
            :::  :..|:.::..||    .:.|.:|                      ..:.||:.:.....|
  Rat   269 LLLTAYFAYVVFMKFNV----QVERWVK----------------------QMINRNKVVKVTVSE 307

  Fly   267 VEIFERT---NSGPNI-NKIRYTTLRMGRSTRISLDRKATRMVLHNRALGRNWGLFKDLFIALRP 327
            .:....|   ...|.: ||.|             |.|..:...||| :|.|| .:|:.:...|.|
  Rat   308 AQAKASTAGDKEEPTLPNKPR-------------LQRGGSSASLHN-SLMRN-SIFQLMIHTLDP 357

  Fly   328 INCE-------KW-----RKGNIIKRAFMLTKIPAVIICCI--------YIPLVDYELDKHGWNK 372
            :..|       |:     .:|...::|.:|.|| |...|.:        ....|||..:|   .:
  Rat   358 LAEELGSYGKLKYYDTMTEEGRFREKASILHKI-AKKKCQVDENERQNGAANHVDYAAEK---IE 418

  Fly   373 LLN--CIQVMLNPAM-------------SIMAIKALLSS--------RGNSLWYVAMGEEAIYAM 414
            |.|  ..:|.:.|:.             ||.|..|..::        :..||.:.:...:.|..:
  Rat   419 LPNSTSTEVEMTPSSEASEPVQNGNLSHSIEAADAPQATETAEEDDDQPLSLSWPSNTRKQITFL 483

  Fly   415 YSLPITVPIAVFMFIQSRTDVPPFYHSVFTVMNLTGSMFMIFICATEIDKVLEVIGHILKVEDDF 479
            ..|||..|:.:.:     .||.......|..:...||:..|.:.:..:......:|..:.:.::.
  Rat   484 IVLPIVFPLWITL-----PDVRKPASKKFFPITFFGSITWIAVFSYLMVWWAHQVGETIGISEEI 543

  Fly   480 MGATVKACTGSLGPLIANVAMALHGYPRMAYASAIGGPFFTVVMSAS------TVMHVKNLFGLP 538
            ||.|:.|...|:..||.:|.:|..|...||.:|::|...|.:.:...      |::|...    |
  Rat   544 MGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVGLPLPWLLYTIIHRFK----P 604

  Fly   539 VSEANQTGNYGLNA-----FIFLNLGVFSTLL--W--STTLGFFARRSVGIFSIVFYCIYLLFAI 594
            |:.::.    ||..     ||.|...:.|..|  |  :..|||.      :|.:  |..:|:.::
  Rat   605 VTVSSN----GLFCAIVLLFIMLIFVILSIALCKWRMNKILGFI------MFGL--YFAFLVVSV 657

  Fly   595 LIHRKVI 601
            |:..||:
  Rat   658 LLEDKVL 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12376NP_610405.3 PLN03151 33..592 CDD:215604 126/581 (22%)
Na_Ca_ex 85..219 CDD:279963 34/140 (24%)
Na_Ca_ex 448..595 CDD:279963 37/161 (23%)
Slc24a2NP_113931.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 67..86
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..122
TIGR00367 138..652 CDD:273039 125/578 (22%)
Na_Ca_ex 139..281 CDD:279963 35/141 (25%)
Alpha-1 175..215 14/40 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 312..335 7/35 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 394..414 4/19 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 450..471 3/20 (15%)
Na_Ca_ex 507..658 CDD:279963 38/166 (23%)
Alpha-2 550..581 11/30 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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