DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12376 and CCX4

DIOPT Version :9

Sequence 1:NP_610405.3 Gene:CG12376 / 35857 FlyBaseID:FBgn0033323 Length:617 Species:Drosophila melanogaster
Sequence 2:NP_564650.1 Gene:CCX4 / 841851 AraportID:AT1G54115 Length:644 Species:Arabidopsis thaliana


Alignment Length:613 Identity:134/613 - (21%)
Similarity:252/613 - (41%) Gaps:107/613 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 TVSCYAANTF-PFEERCAFVASAKDCNRSTNVLPYMRIMACDLNCVNEFEQVIFLALFMGLCYEI 85
            ||||...:.. .:.::|.|:.|...|: ......|::...|  :| .:|:.:.::.|.:.| ..:
plant    88 TVSCSGLHEHRGYADQCEFLKSNPICS-PDGFFDYLKFFYC--SC-RDFKILGYILLGVWL-VAL 147

  Fly    86 LVLLIHVCNKYYSPALKAVSRFLCMNEHVAGVTLLAFGNSSADLFSNLASV--NANVPVFANS-L 147
            ..||.:....|:..:|:.:|:.|.:...|||||||..||.:.|:|:::|:.  :....|..|| |
plant   148 FYLLGNTAADYFCCSLEKLSKLLRLPPTVAGVTLLPLGNGAPDVFASIAAFVGSDKGEVGLNSVL 212

  Fly   148 AAALFVSMVSGGLI--CYT-SPFKMNAYESVRDILFLIFGSMLLQYFLASSAHVPETSFIVMFLV 209
            ..|:||:.|..|::  |.. ...|::....:||:.|.:|..:.|...| ....|.....|....:
plant   213 GGAVFVTCVVVGIVSLCVADKEVKIDKKCFIRDLSFFLFTLVALMVIL-MVGKVTVGIAIAFVSI 276

  Fly   210 YIFYILVNVVDVYLIRRALKTTNAQIDALLVGEMTPEKRKRLS--ELERNQAIYTRDMEVEIFER 272
            |:||..:...:..|.:.:.:.....|..||     |.:....|  .:|.:..:|:..||::    
plant   277 YVFYASLVAANEILRKHSRRLKLDSITPLL-----PMQGSVFSSPSVEEDIPMYSPLMELD---- 332

  Fly   273 TNSGPNINKIRYTTLRMGRSTRI--SLDR--KATRMVLHNRALGR---------NWGLFKDLFIA 324
            |..||               .|:  ||.:  .||.:.:::....:         .||..:|    
plant   333 TGEGP---------------PRLHDSLPQWMWATNVAIYSNHFAKANVHDEERPPWGWTED---- 378

  Fly   325 LRPINCEKWRKGNIIKRAFMLTKIPAVIICCIYIPLVDYELDKHGWNKLLNCIQVMLNPAMSIMA 389
                ..|.  :.::..:...|.:.|..:...:.|||:    ::..|:|......|.|.|.:    
plant   379 ----GAEV--ESSLCSKITSLLETPLTVPRRLTIPLI----EEDSWSKTYAVASVSLAPVL---- 429

  Fly   390 IKALLSSRGNSLWYVAMGEEAIYAMYSLPITV--PIAVFMFIQSRTDVPPFYHSVFTVMNLTGSM 452
            :..|.||:.::      ..:|....|.:.|.:  .:....|..:..|.||   .::.:..:.|..
plant   430 LSFLWSSQDDT------SLQARIVAYFIGIAIGSTLGYLAFKNTEPDRPP---QIYLIPWVLGGF 485

  Fly   453 FM----IFICATEIDKVLEVIGHILKVEDDFMGATVKACTGSLGPLIANVAMALHGYP--RMAYA 511
            .|    .::.|.|:..:|...|.|..:....:|.||.|...|:|.|::|:|::::|..  ::|.:
plant   486 IMSIVWFYMIANELVALLVTFGGIYGINPSILGLTVLAWGNSMGDLVSNIALSMNGGDGVQIALS 550

  Fly   512 SAIGGPFFTVVMSASTVMHV----KNLFGLPVSEANQTGNYGLNAFIFLNLG--VFSTLLWSTTL 570
            ....||.|..::.....|.:    |:.....:.|.|.         :|..||  :|. |:||..:
plant   551 GCYAGPMFNTLVGLGMSMFLGAWSKSPETYMIPEDNS---------LFYTLGFLIFG-LIWSLVM 605

  Fly   571 ----GFFARRSVGIFSIVFYCIYLLFAI 594
                .....:.:||..|..|.|::.|.:
plant   606 LPRNEMRPNKVMGIGLITLYLIFVTFRL 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12376NP_610405.3 PLN03151 33..592 CDD:215604 129/597 (22%)
Na_Ca_ex 85..219 CDD:279963 40/139 (29%)
Na_Ca_ex 448..595 CDD:279963 38/163 (23%)
CCX4NP_564650.1 PLN03151 1..644 CDD:215604 134/613 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41602
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57812
OrthoDB 1 1.010 - - D478735at2759
OrthoFinder 1 1.000 - - FOG0000933
OrthoInspector 1 1.000 - - mtm1105
orthoMCL 1 0.900 - - OOG6_101277
Panther 1 1.100 - - O PTHR12266
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X612
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.790

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