DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12376 and CG34162

DIOPT Version :9

Sequence 1:NP_610405.3 Gene:CG12376 / 35857 FlyBaseID:FBgn0033323 Length:617 Species:Drosophila melanogaster
Sequence 2:NP_001097149.2 Gene:CG34162 / 5740392 FlyBaseID:FBgn0085191 Length:535 Species:Drosophila melanogaster


Alignment Length:634 Identity:121/634 - (19%)
Similarity:213/634 - (33%) Gaps:194/634 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 ERCAFVASAKDCNRSTNVLPYMRIMACDLNCVNEFEQVIFLALFMGLCYEIL---VLLIH----- 91
            :.|....|...|.....::.|:.|..|           :|....|.: |.::   :|::|     
  Fly    24 QTCGLARSTLSCGSLVYLINYLDICFC-----------VFKLPTMSI-YGLISAFLLMVHLSVLF 76

  Fly    92 -VCNKYYSPALKAVSRFLCMNEHVAGVTLLAFGNSSADLFSNLASVNANVPVFANSLAAALFVSM 155
             |...::.|.|..:..|..|.  :.|.:.|.||                 |.|        |||.
  Fly    77 MVTKYFFVPNLATLIEFAPMT--MFGSSFLLFG-----------------PTF--------FVSY 114

  Fly   156 VSG----------GLICYTSPFKMNAYESVRDIL-FLIFGSMLL---QYFLASSAHVPETSFIVM 206
            .:.          ..|| .||.:.  .:.:.||| :::.|.|::   .|.:.........|||:.
  Fly   115 YNSFWEICNPRKPESIC-LSPLQF--AKIMGDILRYIVIGFMVICAQGYRVDGITFWSCLSFILT 176

  Fly   207 FLVYIFYILVNVVDVYLIRRALKTTNAQID--------ALLVGEMTPEKRKRLSELERNQAIYTR 263
            .:||::.::....:||||...|.:...::.        .|||..:......:.|:::..|.    
  Fly   177 GMVYLYIVIKKSYNVYLIVADLYSIKFRVTVFLYTFLMVLLVIFVVSYANFQRSKVKSKQT---- 237

  Fly   264 DMEVEIFERTNSGPNINKIRYTTLRMGRSTRISLDRKATRMVLHNRALGRNWGLFKDLFIALRPI 328
               .|.|...:||..|                 |.:...:|....|.:   |         |:.:
  Fly   238 ---QENFLEMDSGDEI-----------------LGKYQKQMEFSRREI---W---------LKAV 270

  Fly   329 N-CEKWRKGNIIKRAFMLTKIPAVIICCIYIPLVDYELDKHGWNKLLNCIQVMLNPAMSIMAIKA 392
            | .......|:|.|..|   ||:..:...:||::..:....||||..:|:.:...|.:.:     
  Fly   271 NGYRNMADSNVIYRIAM---IPSYFVLANFIPVISNDRALIGWNKYTSCLGLFFLPIICL----- 327

  Fly   393 LLSSRGNSLWYVAMGEEAIYAMYSLPITVPIAVFMFIQSRTDVPPFYHSVFTVMNLTGSMFMIFI 457
                        ..|.:|:..:........:::..||.:.:...|....:|.::.|..|...|.:
  Fly   328 ------------PHGFKAVSWLIMFLTCWTLSILTFISTHSLRRPNNIWIFALLGLIVSSVFINL 380

  Fly   458 CATEIDKVLEVIGHILKVEDDFMGATVKACTGSLGPLIA------------------NVAMALHG 504
            .:.||:   .:|...:.::.|.|..........||.:::                  .|.|:|  
  Fly   381 LSREIE---NIIYQYISMQFDVMPDVTALVYFGLGEMLSESIVVRCLQQRKMWDATFGVVMSL-- 440

  Fly   505 YPRMAYASAIGGP--FF----------TVVMSASTVMHVKNLFGLPVSEANQTGNYGLNAFIFLN 557
               :.||..:..|  ||          .|..|..|.:|                      |||| 
  Fly   441 ---VTYAIFLAFPLLFFQGCYNNKCSIMVTSSTETTIH----------------------FIFL- 479

  Fly   558 LGVFSTLLWSTTL-GFFARRSVGIFSIVFYCIYLLFAILIHRKVIHSFS 605
              |.||.|...:| |:..|.|:..:.:|....|:....:.|...|.||:
  Fly   480 --VLSTCLLHVSLSGYEFRISLLFYLLVLTVFYVTLQWMTHYDWILSFA 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12376NP_610405.3 PLN03151 33..592 CDD:215604 117/619 (19%)
Na_Ca_ex 85..219 CDD:279963 31/156 (20%)
Na_Ca_ex 448..595 CDD:279963 36/177 (20%)
CG34162NP_001097149.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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