DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12376 and slc24a6a

DIOPT Version :9

Sequence 1:NP_610405.3 Gene:CG12376 / 35857 FlyBaseID:FBgn0033323 Length:617 Species:Drosophila melanogaster
Sequence 2:XP_009289475.1 Gene:slc24a6a / 561209 ZFINID:ZDB-GENE-100922-39 Length:639 Species:Danio rerio


Alignment Length:627 Identity:133/627 - (21%)
Similarity:233/627 - (37%) Gaps:171/627 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 VNEFEQVIF-----------LALFMGLCYEILVLLIHVCNKYYSPALKAVSRFLCMNEHVAGVTL 119
            ::||.|.||           |.:|..: |....|.| ||:.::.|:|:.:...|.::|.|||.|.
Zfish    89 IHEFPQDIFTKGQRRHGAILLHVFCAV-YMFYALAI-VCDVFFVPSLEKICENLHLSEDVAGATF 151

  Fly   120 LAFGNSSADLFSNLASV---NANVPVFANSLAAALFVSMVSGGL--ICYTSPFKMNAYESVRDIL 179
            :|.|:|:.:||::|..|   ..::.| ...:.:|:|..:|..|:  |.......:..:...||.:
Zfish   152 MAAGSSAPELFTSLIGVFITKGDLGV-GTIVGSAVFNILVIIGVCGIFAGQTITLTWWPLFRDSI 215

  Fly   180 FLIFGSMLLQYFLASSAHVPETSFIVMFLVYIFY----------ILVNVVDVYLIRRALKTTNAQ 234
            |.|..                    |:.|:.|.|          ||:::..||::   :...|:|
Zfish   216 FYILS--------------------VLALILIIYDEKVIWWETIILISMYGVYIL---IMKFNSQ 257

  Fly   235 I---------------------DALLVGEMTPEKRKRLSELERNQAIYTRDMEVEIFERTNS-GP 277
            |                     ..:.|||.:|.....:..|::.|....:|..|.:.:...| .|
Zfish   258 IWGWVEQRFGIPGQPCLVSSLRRDVSVGEASPHCDTSMILLKKGQNAGGQDSPVVMVDELMSLHP 322

  Fly   278 NINKIRYTTLRM------GRSTRISLDRKATRM-------VLHNRALGRN--------------- 314
            :.......:||:      ...||:|:   |.||       ::.||:.|.:               
Zfish   323 HQFSFSEASLRVMITPHFSPRTRLSM---AGRMLITERQRLIRNRSPGDSSGSGAGDTPGQDGPG 384

  Fly   315 -----WGLFKD--LFIALRPINCEKWR-KGNIIKRAFMLTKIPAVIICCIYIPLVDYELDKHGWN 371
                 |||...  |....:|:...:.| :|..::|...:....         |..|.|.::....
Zfish   385 MEAVPWGLENGGALESETQPLEEPRRRSQGGELERVADIEDTQ---------PKDDEEDEEEADE 440

  Fly   372 KLLNCIQVMLNPAMSIMAIKALLSSRGNSLWYVAMGEEAIYAMYSLPI------TVPIAVFMFIQ 430
            :......|                  ....|     |:|.: |:|.|:      |||..|.    
Zfish   441 EPFRPFTV------------------PEGRW-----EQAKW-MFSWPLSCLLYYTVPNCVL---- 477

  Fly   431 SRTDVPPFYHSVFTVMNLTGSMFMIFICATEIDKVLEVIGHILKVEDDFMGATVKACTGSLGPLI 495
                  |.:...|.| ....|...|.:.:..:..::.:|...|.:.|..||.|..|...|:...:
Zfish   478 ------PRWERWFMV-TFVASTLWIAVFSYLMVWMVTIISFTLDIPDVVMGITFLAAGTSVPDCM 535

  Fly   496 ANVAMALHGYPRMAYASAIGGPFFTVVMSASTVMHVKNL---FGLPVSEANQTGNYGLNAFIFLN 557
            |::.:|..|...||.:::||...|.:::.......::.|   :|..|| .|..|.  :.:.|.|.
Zfish   536 ASLIVARQGMGDMAVSNSIGSNIFDILLGLGFPWALRTLVVDYGSTVS-INSKGL--VYSVILLL 597

  Fly   558 LGVFSTLLWSTTLGFF-ARRSVGIFSIVFYCIYLLFAILIHR 598
            ..||.|:| |..|..: ..|.:|:..:..|.|:||.:|...:
Zfish   598 ASVFLTVL-SVHLNHWRLDRRLGLGLMFLYAIFLLCSICFEK 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12376NP_610405.3 PLN03151 33..592 CDD:215604 131/619 (21%)
Na_Ca_ex 85..219 CDD:279963 35/148 (24%)
Na_Ca_ex 448..595 CDD:279963 38/150 (25%)
slc24a6aXP_009289475.1 Na_Ca_ex <85..637 CDD:332332 133/624 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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