DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12376 and slc24a1

DIOPT Version :9

Sequence 1:NP_610405.3 Gene:CG12376 / 35857 FlyBaseID:FBgn0033323 Length:617 Species:Drosophila melanogaster
Sequence 2:XP_009291877.2 Gene:slc24a1 / 558299 ZFINID:ZDB-GENE-060503-191 Length:741 Species:Danio rerio


Alignment Length:672 Identity:127/672 - (18%)
Similarity:238/672 - (35%) Gaps:209/672 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 PYMRIMACDLNCVNEFEQVIF-----------LALFMGLCYEILVLLIHVCNKYYSPALKAVSRF 107
            |:|:         .|:.:.||           |.:| |:.|..:.|.| ||::::.|.|..::..
Zfish   149 PHMK---------GEYPEDIFSIEDRRKGWVSLHIF-GMVYMFVSLAI-VCDEFFVPTLGVITDK 202

  Fly   108 LCMNEHVAGVTLLAFGNSSADLFSNLASV---NANVPVFANSLAAALFVSMVSGGLICYTS--PF 167
            |.:::.|||.|.:|.|.|:.:||::|..|   ::||.: ...:.:|:|..:...|:....|  ..
Zfish   203 LAISDDVAGATFMAAGGSAPELFTSLIGVFISHSNVGI-GTIVGSAVFNILFVIGMCALFSREML 266

  Fly   168 KMNAYESVRDILFLIFG-SMLLQYFLASSAHVPETSFIV-MFLVYIFYILVNVVDVYLIRRALKT 230
            .:..:...||:.|.|.. .||:.:||.::....|:..:| .:.:|:.::..||    .:.||.|:
Zfish   267 HLTWWPLFRDVSFYILDLIMLIIFFLDNTIMWWESMMLVGGYALYVTFMKFNV----QLERAFKS 327

  Fly   231 TNAQ----IDALLVGEMTPEKRKRLSELERNQAIYTRDMEVEIFERTNSGPNINKIRYTTLRMGR 291
            ..::    :..:.|.|  |||....|..|      .|..|.|...|....|        ||:.|.
Zfish   328 QLSKHKSIVKVIAVEE--PEKDNGTSGEE------NRPPEPEDKNRLKLKP--------TLQRGG 376

  Fly   292 STRISLDRKATRMVLHNRALGRNWGLFKDLFIALRPINCEKWRKGNIIKRAFMLTKIPAVIICCI 356
            |:          ..|||..: || .:|:.:...|.|:..|....|:...|:.:..|:        
Zfish   377 SS----------ASLHNSTM-RN-TIFQLMIHTLDPLGEESVFNGDAKARSSLECKV-------- 421

  Fly   357 YIPLVDYELDKHGWNKLLNCIQVMLNPAMSIMAIKAL---------------------------- 393
                           |..:..|::.:.|...:..|..                            
Zfish   422 ---------------KFKDKAQILNDMARGKVENKKKEKSGEGDDQSEQTKDSKDAPPGAKDEDT 471

  Fly   394 -----------LSSRGNS----------------------------------------------- 400
                       :::.|.|                                               
Zfish   472 NQKSEAQKDGDIAAGGGSENPGGSDNSGDDDEDDSDEESDDDDDDDDDDDDDDDENEDEAGEDGD 536

  Fly   401 -----LWYVAMGEEAIYAMYSLPITVPIAVFMFIQSRTDVPPFYHSVFTVMNLTGSMFMIFICAT 460
                 .|.....::|.| ::.|||..|:.:.:     .||.......|.|:...||:..|.|.:.
Zfish   537 EPLSLEWPDTRRKQATY-LFLLPIVFPLWLTV-----PDVRNPASKKFFVITFLGSIVWIAIFSY 595

  Fly   461 EIDKVLEVIGHILKVEDDFMGATVKACTGSLGPLIANVAMALHGYPRMAYASAIGGPFFTVVMSA 525
            .:......:|..:.:.::.||.|:.|...|:..||.:|.:|..|...||.:|::|...|.:.|  
Zfish   596 LMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITM-- 658

  Fly   526 STVMHVKNLFGLPV-----------SEANQTGNYGLNAFIFLNLGVFSTLLWSTTLGFFARRSVG 579
                      ||||           :....:.|....|.:.|.|.:...::......:...:.:|
Zfish   659 ----------GLPVPWLMFSFFHSFAPVPVSSNGLFCAIVLLFLMLLFVIISIAACKWRMNKVLG 713

  Fly   580 IFSIVFYCIYLLFAILIHRKVI 601
            ....:.|.::|:.::::..::|
Zfish   714 FTMFILYFVFLVLSVMLEDRII 735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12376NP_610405.3 PLN03151 33..592 CDD:215604 126/661 (19%)
Na_Ca_ex 85..219 CDD:279963 36/140 (26%)
Na_Ca_ex 448..595 CDD:279963 32/157 (20%)
slc24a1XP_009291877.2 Na_Ca_ex <112..741 CDD:332332 127/672 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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