DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12376 and slc24a4a

DIOPT Version :9

Sequence 1:NP_610405.3 Gene:CG12376 / 35857 FlyBaseID:FBgn0033323 Length:617 Species:Drosophila melanogaster
Sequence 2:XP_005158898.1 Gene:slc24a4a / 550467 ZFINID:ZDB-GENE-050417-291 Length:621 Species:Danio rerio


Alignment Length:655 Identity:140/655 - (21%)
Similarity:246/655 - (37%) Gaps:191/655 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 FVASAKDCNRSTNVLPYMRIMA-----------CDLNCVNEFEQVIF-----------LALFMGL 81
            |.||:....|        |:||           |....::||.:.:|           |.:|..|
Zfish    69 FAASSDRLGR--------RLMATVGDNETQEKNCTAPAIHEFPEDLFTNQQRSQGAVLLHIFAAL 125

  Fly    82 CYEILVLLIHVCNKYYSPALKAVSRFLCMNEHVAGVTLLAFGNSSADLFSNLASV---NANVPVF 143
             |..|.|.| ||:.|:..:|:.:...|.::|.|||.|.:|.|:|:.:||:::..|   :.:|.| 
Zfish   126 -YMFLALAI-VCDDYFVTSLEKICEKLHLSEDVAGATFMAAGSSAPELFASIIGVFITHGDVGV- 187

  Fly   144 ANSLAAALF-------VSMVSGGLICYTSPFKMNAYESVRDILFLIFGSMLLQYFLASSAHVPET 201
            ...:.:|:|       |..:..|.:.:     :..|...||..:.|...:.|..|:... .:...
Zfish   188 GTIVGSAVFNILCIIGVCGIFAGQVVF-----LTKYAVFRDSSYYIISVIALIVFIYDD-EILWW 246

  Fly   202 SFIVMFLVYIFYILV-----NVVDVYLIRRALKTTNAQIDALLVGEMTP-----------EKRKR 250
            ..:|:.::|:.||:|     ::.:::..:...:.||..   .:..||.|           .....
Zfish   247 ESLVLIVMYLGYIIVMKFNTSLQNLFNGKEDKRVTNGN---AVSSEMEPGNDCFEQFWDDPSWPL 308

  Fly   251 LSELERNQAIYTRDMEVEIFERTNSGPNINKIRYTTLRM------GRSTRISLDRKATRMVLHNR 309
            |:.::.|: ||||...|.:.|..||.|...:.....||:      |..||:   |.|:|::::.:
Zfish   309 LAPVKPNK-IYTRGSVVMVDEMMNSSPPHYRFPEAGLRVMITNHFGPKTRL---RMASRLIINEQ 369

  Fly   310 ------ALGRNWGLFKDLFIALRPINCEKWRKGNIIKRAFMLTKIPAVIICCIYIPLVDYELDKH 368
                  |.|.:..|..|.       ..:....||:                      .:.:|.:.
Zfish   370 QRLVKSANGVDSVLVSDQ-------KADTMENGNV----------------------AEDKLSEE 405

  Fly   369 GWNKLLNCIQVMLNPAMSIMAIKALLSSRGNSLWYVAMGEEAIYAMYSLPITVPIAVFMFIQSRT 433
            ..|:    |.....|..::..:|..:|      |                   ||::.::     
Zfish   406 QENE----ISPFRLPEGAMDTVKFFIS------W-------------------PISLLLY----- 436

  Fly   434 DVPPFYHSVFTVMNLTG---------SMFMIFICATEIDKVL----EVIGHILKVEDDFMGATVK 485
                     ||:.|...         |.|:..:.......:|    .::|:.|.:.|..||.|..
Zfish   437 ---------FTIPNCAKKRWECCFMLSFFLSTVWIAAFSYILVWMVTIVGYTLGIPDVIMGITFL 492

  Fly   486 ACTGSLGPLIANVAMALHGYPRMAYASAIGGPFFTVVMSASTVMHVKNLFGLPVSEANQTGNYGL 550
            |...|:...||::.:|..|...||.::.||...|.:::.          .|:|........|||.
Zfish   493 AAGTSVPDCIASLIVARQGLGDMAVSNTIGSNVFDILVG----------LGVPWGIQTMAVNYGS 547

  Fly   551 NAFIFLNLGVFSTLLW-----STTLGFFARR-----SVGIFSIVFYCIYLLFAILIHRKVIHSFS 605
            ...|.....|:|.:|.     .|.||....|     .:||:.:|.|.|:|.|:|:|...|. :| 
Zfish   548 VVKINSRGLVYSVVLLLGSVALTVLGIHVNRWRLDLRLGIYVLVLYAIFLTFSIMIEYNVF-TF- 610

  Fly   606 VDLPV 610
            |:||:
Zfish   611 VNLPM 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12376NP_610405.3 PLN03151 33..592 CDD:215604 132/635 (21%)
Na_Ca_ex 85..219 CDD:279963 36/148 (24%)
Na_Ca_ex 448..595 CDD:279963 40/169 (24%)
slc24a4aXP_005158898.1 TIGR00367 119..596 CDD:273039 119/574 (21%)
Na_Ca_ex 120..262 CDD:279963 38/150 (25%)
Na_Ca_ex 451..602 CDD:279963 40/160 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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