DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12376 and CG1090

DIOPT Version :9

Sequence 1:NP_610405.3 Gene:CG12376 / 35857 FlyBaseID:FBgn0033323 Length:617 Species:Drosophila melanogaster
Sequence 2:NP_001262252.1 Gene:CG1090 / 40551 FlyBaseID:FBgn0037238 Length:633 Species:Drosophila melanogaster


Alignment Length:612 Identity:132/612 - (21%)
Similarity:221/612 - (36%) Gaps:156/612 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 NC----VNEFEQVI---FLALFMGLCYEILVL------LIHVCNKYYSPALKAVSRFLCMNEHVA 115
            ||    :.:|.|.:   :.....||...|||.      |..||::|:..:|..:...|.::..||
  Fly    90 NCTPPAIEQFPQPLMNKWARQHGGLILHILVAVFTFFGLAIVCDEYFVASLDRLCEELKLSPDVA 154

  Fly   116 GVTLLAFGNSSADLFSNLASVNANVPVFANS-------LAAALF-------VSMVSGGLICYTSP 166
            |.|.:|.|:|:.:|.:.:..|     .||..       :.:|:|       |..:..|.:|    
  Fly   155 GATFMAAGSSAPELATVVIGV-----FFAKDDIGISGVIGSAVFNIMFVISVCALCSGTVC---- 210

  Fly   167 FKMNAYESVRDILFLIFGSMLLQYFLASSAHVPETSFIVMFLVYIFYILVNVVDVYLIRRALKTT 231
             ::|.:..|||..|... |:|:...:..:..:.....:||.|.|:.|.:           ||. .
  Fly   211 -QLNWWPLVRDCFFYCV-SILVMLIIIFNDVISCFESVVMLLCYVGYCV-----------ALH-F 261

  Fly   232 NAQIDALLVGEMTPEKRKRLSELERNQAIYTRDMEVEIFERTNSGPNINKIRYTTLRMGRST-RI 295
            |.:::...:|...|.|   |...|...|:.|.             .|:.:..||...:|::. :.
  Fly   262 NTELERWALGLNLPFK---LPSKEEQSALVTY-------------KNVPEGSYTQESVGQTQGQK 310

  Fly   296 SLDRKATRMVL----------------HNRALGRNWGLFKDLFIALRPINCEKWRKG-----NII 339
            :.|...||...                .|.|    ||..........|...:.|..|     |:.
  Fly   311 ATDDSETRSAKPQSDYQDYSDPNPTWDPNAA----WGDESQPNPVANPPPVDDWGMGHSGQENMG 371

  Fly   340 KRAFMLTKI------PAVIICCIYIPLVDYELDKHGWNKLLNCIQVMLNPAMSIM------AIKA 392
            ..|.....:      ||.:.....:  |..:....|.|...........|....:      .:.|
  Fly   372 YHADQPESVVTGDGPPAAVKSGGQV--VSTQATSAGGNDYYKSTDKQREPRRDPLLRPMEGGLPA 434

  Fly   393 LLSSRGNSLWYVAMGEEAIYAMYSL-PITVPIA---------VFMFIQSRTDVPPFYHSVFTVMN 447
            |:|      |||      :|.::.| ..|:|..         .|.|:.|...: .||        
  Fly   435 LVS------WYV------VYPIHFLCKKTMPDCRQEQYRNWYPFTFLMSMVWI-SFY-------- 478

  Fly   448 LTGSMFMIFICATEIDKVLEVIGHILKVEDDFMGATVKACTGSLGPLIANVAMALHGYPRMAYAS 512
               |.||::        ::.|||..|.:.|..||.|..|...|:...::::|:...|:..||.::
  Fly   479 ---SYFMVW--------MITVIGSTLAIPDTVMGLTFVAAGVSVPDALSSIAVIKEGFGDMAVSN 532

  Fly   513 AIGGPFFTVVMSASTVMHVKNLFGLPVSEANQTGNYGLNAFIFLNLGVFST---LLWSTTL-GFF 573
            |||...|.:::.......::.....|.|..|.... ||   .:..|.:|||   |:.||.| |:.
  Fly   533 AIGSNVFDILVCLGLPWFIQTAIIKPGSHVNVISK-GL---AYSTLSLFSTVVFLILSTHLNGWK 593

  Fly   574 ARRSVGIFSIVFYCIYLLFAILIHRKV 600
            ..:.:||..:|:|..::..|.|....|
  Fly   594 LDKRLGIILMVWYLFFITLASLYELNV 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12376NP_610405.3 PLN03151 33..592 CDD:215604 129/602 (21%)
Na_Ca_ex 85..219 CDD:279963 37/153 (24%)
Na_Ca_ex 448..595 CDD:279963 40/150 (27%)
CG1090NP_001262252.1 TIGR00367 116..609 CDD:273039 123/573 (21%)
Na_Ca_ex 117..257 CDD:279963 37/150 (25%)
Na_Ca_ex 463..615 CDD:279963 45/175 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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