DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12376 and zyd

DIOPT Version :9

Sequence 1:NP_610405.3 Gene:CG12376 / 35857 FlyBaseID:FBgn0033323 Length:617 Species:Drosophila melanogaster
Sequence 2:NP_001015261.3 Gene:zyd / 3354992 FlyBaseID:FBgn0265767 Length:542 Species:Drosophila melanogaster


Alignment Length:613 Identity:130/613 - (21%)
Similarity:232/613 - (37%) Gaps:151/613 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 IMACDLNC----VNEFEQVIF---------LALFMGLCYEILVLLIHVCNKYYSPALKAVSRFLC 109
            ::.|.:||    :::|.:.:|         :.|.:.....:.|.|..||::|:.||::.:...|.
  Fly    15 LLFCYINCTQPAIDDFPRDLFSEAQRQSGAVVLHVIASLYLFVALAVVCDEYFVPAVEKICAALN 79

  Fly   110 MNEHVAGVTLLAFGNSSADLFSNL-----------ASVNANVPVFANSLAAALFVSMVSGGLICY 163
            |:..|||.|.:|...|:.:||.|:           ........|| |.||.|....:.:|    .
  Fly    80 MSNDVAGATFMAAATSAPELFVNVIGTFITEGDIGVGTIVGSAVF-NILAVAACCGIGAG----M 139

  Fly   164 TSPFKMNAYESVRD---------ILFLIFGSMLLQYFLASSAHVPETSFIVMFLVYIFYILVNVV 219
            |.|  ::.:...||         ||..:.....::::.|          :::..:|..|:.|   
  Fly   140 TIP--LDWWPLTRDSIAYGVTVAILICVMHDERVEWYEA----------LILVSLYAVYLAV--- 189

  Fly   220 DVYLIRRALKTTNAQIDALLVGEMTPEKRKRLSELERNQAIYTR---DMEVEIFE---------- 271
             :|..:...|.....:           |:.|......|.:|:|:   :.|.|:.|          
  Fly   190 -MYFDKTFQKCAKGGV-----------KQARSRSRSSNCSIHTKNSNEKEPELVENRICQNMANI 242

  Fly   272 RTNSGPNINKIRYTTLRMGRSTRISLDRKA-TRMVLHNRALGRNWGLFKDLFIALRPINCEKWRK 335
            :.|.|.|..:.:.|:.....:|.||:.... |..:....:.|...|                   
  Fly   243 QLNGGLNKEQAKATSTSGAGTTAISITTSTMTTTLSTTHSAGGGGG------------------- 288

  Fly   336 GNIIKRAFMLTKIPAVIICCIYIPLVDYELDKHGWNKLLNCIQVMLNPAMSIMAIKALLSSRGNS 400
                  |..|...|..|:  ...||.|.|.:.|                :::.|........|.|
  Fly   289 ------AVGLCSGPGAIV--QMAPLDDAEAESH----------------VAVAAADEGRKEEGYS 329

  Fly   401 LWYVAMGEEAIYAMYSLPITVPIAVFMFIQSRTDVPPF----YHSVFTVMNLTGSMFMIFICATE 461
            |..... :::.:|.::..|..||.:..    |..:|..    .:.:|.   ||..|.:::|.:..
  Fly   330 LLSYPK-DKSCFAQFTWLIIWPIHLLF----RIAIPDCKKAKNNKIFP---LTFIMCIVWIGSLS 386

  Fly   462 --IDKVLEVIGHILKVEDDFMGATVKACTGSLGPLIANVAMALHGYPRMAYASAIGGPFFTVVMS 524
              :..::.:||..||:.|..||.|..|...|:...:::|.:|..|:..|...::||...|.:::.
  Fly   387 YVVAWMITIIGDTLKIPDSVMGITFLAAGTSVPEAVSSVIVAKRGHGSMGICNSIGSNTFDILLC 451

  Fly   525 ASTVMHVKNLFGLPVSEANQTG-NY------GLN-AFIFLNLGVFSTLLWSTTLGFFARRSVGIF 581
            ......:|.:| .|:    |.| ||      ||. :.|.|...:|...|..:|..|...:.||..
  Fly   452 LGVPWLIKAVF-FPI----QPGQNYVAINSAGLEYSAITLLSTLFLLYLTFSTNKFKLDKKVGTA 511

  Fly   582 SIVFYCIYLLFAILIHRKVIHSFSVDLP 609
            .:|.|.::::||.||...|.  |.|:||
  Fly   512 CLVMYLVFMVFASLIELNVF--FRVNLP 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12376NP_610405.3 PLN03151 33..592 CDD:215604 121/594 (20%)
Na_Ca_ex 85..219 CDD:279963 35/153 (23%)
Na_Ca_ex 448..595 CDD:279963 42/156 (27%)
zydNP_001015261.3 ECM27 46..522 CDD:223604 116/563 (21%)
Na_Ca_ex 48..192 CDD:279963 35/164 (21%)
Na_Ca_ex 370..525 CDD:279963 43/162 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1775
SonicParanoid 00.000 Not matched by this tool.
32.840

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