DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12376 and CG17167

DIOPT Version :9

Sequence 1:NP_610405.3 Gene:CG12376 / 35857 FlyBaseID:FBgn0033323 Length:617 Species:Drosophila melanogaster
Sequence 2:NP_001015257.2 Gene:CG17167 / 3354991 FlyBaseID:FBgn0039941 Length:522 Species:Drosophila melanogaster


Alignment Length:564 Identity:106/564 - (18%)
Similarity:195/564 - (34%) Gaps:145/564 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 DLNCVNEFEQ-VIFLALFMGLCYEILVLLIHVCNKYYSPALKAVSRFLCMNEHVAGVTLLAFGNS 125
            ||..|::..| .:.|.:|..:.:.||:.:|  ||.|:.|.::.:...|.:::.||..|.:|...|
  Fly    71 DLFTVDQLRQGWVVLHVFAAVYFFILLAII--CNDYFLPTVECICEDLHLSKDVAAATFMATATS 133

  Fly   126 SADLFSNLASV-----NANVPVFANSLAAALFVSMVSGGL--ICYTSPFKMNAYESVRDILFLIF 183
            ..:.|:|..|.     :..:.....||   :|.::...||  :....|.:::.:...||....:|
  Fly   134 MPEFFTNTISTLILESDMGLGTIIGSL---MFNTLGVAGLAALAIDKPVQLDWWPIARDCFIYVF 195

  Fly   184 GSMLLQYFLASSAHVPETSFIVMFLVYIFYILVNVVDVYLIRRALKTTNAQIDALLVGEMTPEKR 248
            .:::| ..||.|..:..|...:|....|.|.|:..           ..|..:.|:.|        
  Fly   196 NTIIL-LVLAWSGSISFTESCIMMGFLILYYLITF-----------NNNKFMPAIRV-------- 240

  Fly   249 KRLSELERNQAIYTRDMEVEIFERTNSGPNINKIRYTTLRMGRSTRISLDRKATRMVLHNRALGR 313
              ..|...|....||      ::.|....|             |.:..|..|             
  Fly   241 --FIEDRMNCCFSTR------YDLTEPPEN-------------SAKAQLPLK------------- 271

  Fly   314 NWGLFKD------LFIALRPINCEKWRK-GNIIKRAFMLTK--IPAVIICCIYIPLVDYELDKHG 369
                 ||      ||:...|.|...... .|:.:...:..:  :..|:...||.    |..|..|
  Fly   272 -----KDPLSGDGLFVLNLPENTSSMSSTANLTRNKHLNDEDDVADVVPGSIYA----YPRDASG 327

  Fly   370 WNKLLNCIQVMLNPAMSIMAIKALLSSRGNSLWYVAMGEEAIYAMYSLPITVPIAVFMFIQSRTD 434
            |.:                            .|::          :..||.|.:::.:      .
  Fly   328 WMQ----------------------------FWWI----------FVFPIKVTLSLLI------P 348

  Fly   435 VPPFYHSVFTVMNLTGSMFMIFIC----ATEIDKVLEVIGHILKVEDDFMGATVKACTGSLGPLI 495
            .|..|..::.:     |..|..:|    |..|..:|...|..:.|....||.|..|...::...:
  Fly   349 HPMKYRRLYPL-----SFIMCILCIGGNAYLIVWMLTAFGVAIHVPTIVMGLTFLAAGSTMPEAV 408

  Fly   496 ANVAMALHGYPRMAYASAIGGPFFTVVMSASTVMHVKNLFGLPVSEANQTGNYGL--NAFIFL-- 556
            :::....:|...:..::::|.....:::|......:||.......|..|.|..|:  |..|.:  
  Fly   409 SSLISLRNGENGIGVSNSLGANSLAILLSLGVPWFIKNCIHYGTGEPQQVGTQGIEYNILILIIS 473

  Fly   557 NLGVFSTLLWSTTLGFFARRSVGIFSIVFYCIYLLFAILIHRKV 600
            .:.:|..|.:|   |:...:.||:.....|.::::..|||...|
  Fly   474 TMALFIILSFS---GYRLTKRVGVALFTVYGVFIVLQILIEMNV 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12376NP_610405.3 PLN03151 33..592 CDD:215604 102/554 (18%)
Na_Ca_ex 85..219 CDD:279963 34/140 (24%)
Na_Ca_ex 448..595 CDD:279963 30/154 (19%)
CG17167NP_001015257.2 TIGR00367 85..503 CDD:273039 98/537 (18%)
Na_Ca_ex 86..229 CDD:279963 35/148 (24%)
Na_Ca_ex 356..509 CDD:279963 30/160 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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