DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12376 and Slc24a5

DIOPT Version :9

Sequence 1:NP_610405.3 Gene:CG12376 / 35857 FlyBaseID:FBgn0033323 Length:617 Species:Drosophila melanogaster
Sequence 2:XP_038960915.1 Gene:Slc24a5 / 311387 RGDID:1310565 Length:503 Species:Rattus norvegicus


Alignment Length:569 Identity:113/569 - (19%)
Similarity:194/569 - (34%) Gaps:186/569 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 VIF--LALFMGLCYEILVLLIHVCNKYYSPALKAVSRFLCMNEHVAGVTLLAFGNSSADLFSNLA 134
            ||:  :.|:|.:...|      ||:||:.|:|:.:|..|.:::.|||.|.:|.|:|:.:|     
  Rat    72 VIYFLITLYMFMAVSI------VCDKYFLPSLEIISDSLGLSQDVAGATFMAAGSSAPEL----- 125

  Fly   135 SVNANVPVFANS--------------------LAAALFVSMVSGGLICYTSPFKMNAYE-SVRDI 178
             |.|.:.||...                    .|..|..:||| .|.|:........|. ||..:
  Rat   126 -VTAFLGVFITKGDIGISTILGSAIYNLLGICAACGLLSNMVS-TLSCWPLFRDCAVYAVSVGAV 188

  Fly   179 LFLIFGSMLLQYFLASSAHVPETSFIVMFLVYIFYILVNVVDVYLIRRALKTTNAQIDALLVGEM 243
            ..:||.:.:..|..|           ::.|:|..|:|:...|..:.|...||..         ..
  Rat   189 FGIIFDNRVYWYEGA-----------LLLLIYGLYVLLLCFDTTISRYVTKTCR---------PC 233

  Fly   244 TPEKRKRLSELERNQAIYTRDMEVEIF----ERTNSGPNINKIRYTTLRMGRSTRISLDRKATRM 304
            .|...|.:.|....|.:...:.|.:|:    .||:||.......|:.|.:.              
  Rat   234 CPCLAKAMEERSEQQTLLGWENESQIYIRRQSRTDSGIFQEDSGYSQLSLS-------------- 284

  Fly   305 VLHNRALGRNWGLFKDLFIALRPINCEKWRKGNIIKRAFMLTKIPAVIICCIYIPLVDYELDKHG 369
             ||        ||.:   ::..|.:.....:.: ::|.|.:..:|.:.:..:..|          
  Rat   285 -LH--------GLSQ---VSEDPPSVFSMPEAD-LRRIFWVLSLPVITLLALTTP---------- 326

  Fly   370 WNKLLNCIQVMLNPAMSIMAIKALLSSRGNSLW--YVAMGEEAIYAMYSLPITVPIAVFMFIQSR 432
                 :|                     ...||  |..                 |..||     
  Rat   327 -----DC---------------------RRKLWKNYFV-----------------ITFFM----- 343

  Fly   433 TDVPPFYHSVFTVMNLTGSMFMIFICATEIDKVLEVIGHILKVEDDFMGATVKACTGSLGPLIAN 497
               ..|:.|.||.:       :::        ::.:.|..|.:.|..||.|:.|...|:...:|:
  Rat   344 ---SAFWISAFTYV-------LVW--------MVTITGETLGIPDTVMGLTLLAAGTSIPDTVAS 390

  Fly   498 VAMALHGYPRMAYASAIGGPFFTVVMSASTVMHVKNLFGLP---------VSEANQTGNYGLNAF 553
            |.:|..|...||.::.:|...|.::           ..|||         .|...:..:.||...
  Rat   391 VLVARKGKGDMAISNIVGSNVFDML-----------CLGLPWFIKTAFTNASAPIEVNSKGLTYI 444

  Fly   554 -IFLNLGVFSTLLWSTTLGFFARRSVGIFSIVFYCIYLLFAILIHRKVI 601
             |.||:.:|...|.....|:...|.:|:..:|.|......::|....:|
  Rat   445 TISLNISIFLLFLAVHFNGWKLDRKLGVVCLVSYLGLATLSVLYELGII 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12376NP_610405.3 PLN03151 33..592 CDD:215604 111/558 (20%)
Na_Ca_ex 85..219 CDD:279963 39/154 (25%)
Na_Ca_ex 448..595 CDD:279963 32/156 (21%)
Slc24a5XP_038960915.1 2A1904 <20..>241 CDD:273344 49/201 (24%)
2A1904 <293..493 CDD:273344 49/287 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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