DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12376 and ncx-10

DIOPT Version :9

Sequence 1:NP_610405.3 Gene:CG12376 / 35857 FlyBaseID:FBgn0033323 Length:617 Species:Drosophila melanogaster
Sequence 2:NP_001256094.1 Gene:ncx-10 / 190821 WormBaseID:WBGene00003575 Length:668 Species:Caenorhabditis elegans


Alignment Length:668 Identity:145/668 - (21%)
Similarity:265/668 - (39%) Gaps:162/668 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 CYAANTFPFEERCAFVASAKDCNRSTNVLPYMRIMACD----LNCVNEFEQVIFLALFMGLCYEI 85
            |.....:..|:.||::...||.......|.:...:.|:    :..:.....:|:| ||      :
 Worm    57 CLIQKHWTREDTCAYIKCNKDACEGGGYLQWSEYIKCEHSRSIRIILIIISIIYL-LF------L 114

  Fly    86 LVLLIHVCNKYYSPALKAVSRFLCMNEHVAGVTLLAFGNSSADLFSNLASV------NANVPVFA 144
            .|::..|.:.::||::..:.|.|.::|.:||||.|||||.:.|:|.::|||      .|::.: .
 Worm   115 FVVMTVVADDFFSPSIAGIVRHLKISESIAGVTFLAFGNGAPDVFGSIASVITTPKPKADLAI-G 178

  Fly   145 NSLAAALFVSMVSGGLICYTSPFKMNAYESVRDILFLIFGSMLLQYFLASSAHVPETSFIVMFLV 209
            :.:...:||:.|....|..|..|::....::|||:|.|...:.|..:..:..||.    |.|.|.
 Worm   179 DIIGGGIFVTTVVLSAIILTKSFRIAILATIRDIVFFIIADIFLAIWFLTFNHVE----IWMPLT 239

  Fly   210 YIFYILVNVVDVYLIRRALKTTNAQIDALLVGEMTPEKRKR-----LSELERNQAIYTRDMEVEI 269
            ::......||.|.|:|                 :..::|||     :....:..|:.....::..
 Worm   240 FLGLYAAYVVSVILMR-----------------LNSKRRKRARHEKIENARKESAMNHHTHKIST 287

  Fly   270 F--------------------ERTNSGPNINKIRYTTLRMGRSTRISLDR--KATRMVLHNRA-- 310
            |                    ..||:..|....:..:|..|.....|.|.  :|.....|...  
 Worm   288 FIGFFMDYAHVINFFANNKISSMTNNVKNFLDGKEDSLEDGLVDETSDDEGVEAEFHYAHRHVYK 352

  Fly   311 ------------------LGRNWGLFKDLFIALRPINCEKWRKGN-----------------IIK 340
                              ..::|...:|:...|||     | .||                 :|.
 Worm   353 SYDEASLAFTDVEEIQPKTWKSWEWVRDVRNHLRP-----W-PGNDEFYEMNYFSRFITVVAVIP 411

  Fly   341 RAFMLTKIPAVIICCIYIPLVDYELDKHGWNK---LLNC---IQVMLNPAMSIMAIKALLSSRGN 399
            ..|:...||:               ::..|:|   :::|   ||:.|. |:.|.|......|.| 
 Worm   412 TFFLKLTIPS---------------NEMPWSKPILIIHCFCSIQLALF-AVQISAKSPFHGSPG- 459

  Fly   400 SLWYVAMGEEAIYAMYSLPITVPIAVFMFIQSRTD-VPPFYHSVFTVMNLTGSMFMIFICATEID 463
             ||           :|.|.|::.:::.....:..| ...:|..|::.:....|:..|:..::||.
 Worm   460 -LW-----------LYGLLISIILSLLALRFTPLDREQKYYREVYSYLGFLMSIAWIYTISSEII 512

  Fly   464 KVLEVIGHILKVEDDFMGATVKACTGSLGPLIANVAMALHGYPRMAYASAIGGPFFTVVMS---- 524
            .|:.:||....|..:.:|.|:.|.:..:|.::::||:...|:|:||.|:|||||.|:.:.|    
 Worm   513 NVITMIGVATGVSQEILGLTIMAWSNCIGDIVSDVAVVKQGFPKMAMAAAIGGPLFSKLYSRPCQ 577

  Fly   525 ASTVMHVKNL---FGLPVSEANQTGN---------YGLNAFIFLNLGVFSTLLWSTTLGFFARRS 577
            .....::.:|   ||||.:.|...|.         |.| ..:||.:.:|::|:......|..|..
 Worm   578 IKITTYISDLLIGFGLPFTIACLQGKQIDLIITPVYRL-LMLFLAISLFTSLIAIFVQRFKVRWP 641

  Fly   578 VGIFSIVFYCIYLLFAIL 595
            ..:..:..:..:|:|.:|
 Worm   642 HAVALLTVFVAFLIFVLL 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12376NP_610405.3 PLN03151 33..592 CDD:215604 142/655 (22%)
Na_Ca_ex 85..219 CDD:279963 39/139 (28%)
Na_Ca_ex 448..595 CDD:279963 43/162 (27%)
ncx-10NP_001256094.1 PLN03151 35..571 CDD:215604 126/577 (22%)
Na_Ca_ex 113..253 CDD:279963 43/150 (29%)
Na_Ca_ex 492..659 CDD:279963 43/167 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 75 1.000 Domainoid score I5893
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41602
Inparanoid 1 1.050 162 1.000 Inparanoid score I2840
Isobase 1 0.950 - 0 Normalized mean entropy S4675
OMA 1 1.010 - - QHG57812
OrthoDB 1 1.010 - - D257493at33208
OrthoFinder 1 1.000 - - FOG0000933
OrthoInspector 1 1.000 - - mtm4752
orthoMCL 1 0.900 - - OOG6_101277
Panther 1 1.100 - - O PTHR12266
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X612
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.930

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