DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12376 and ncx-9

DIOPT Version :10

Sequence 1:NP_610405.3 Gene:CG12376 / 35857 FlyBaseID:FBgn0033323 Length:617 Species:Drosophila melanogaster
Sequence 2:NP_504342.2 Gene:ncx-9 / 182576 WormBaseID:WBGene00003574 Length:701 Species:Caenorhabditis elegans


Alignment Length:717 Identity:160/717 - (22%)
Similarity:286/717 - (39%) Gaps:172/717 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 EFDNFWDTVSCYAAN-----TFPF------------------EERCAFVASAKDCNRSTNVLPYM 56
            |:|..:|..|..:.|     .|||                  ||:|.::...:|.......|.:.
 Worm    24 EYDQSYDYPSPGSTNFSIYDGFPFDEEMCSSEECLIDKSWTSEEKCEYIKCNQDSCEGGGYLTWS 88

  Fly    57 RIMACDLNCVNEFEQVIFLALFMGLCYEIL--VLLIHVCNKYYSPALKAVSRFLCMNEHVAGVTL 119
            ..:.|..|.     .|..:.:.:|:.|.|:  |::..:.:.::.||:..:...|.|:|.:||||.
 Worm    89 HYVKCQYNI-----GVRVILIILGILYLIILFVIMSSIADDFFCPAISGIVSHLRMSESIAGVTF 148

  Fly   120 LAFGNSSADLFSNLASVNANVP------VFANSLAAALFVSMVSGGLICYTSPFKMNAYESVRDI 178
            |||||.:.|:||:::|| ...|      ...:....::||:.|...:|.:|..||:....::||:
 Worm   149 LAFGNGAPDVFSSISSV-LTTPKPKADLALGDLFGTSIFVTTVVLAIIIFTKSFKVAIIPTLRDL 212

  Fly   179 LF----LIFGSMLLQYFLASSAHVPETSFIVMFLVYIF-YILVNVVDVYLIRRALKTTNAQIDAL 238
            :|    |.|.......|......:|.| |:.::.||:. .|::.:...:..:|.||..|.:::..
 Worm   213 IFYMTTLAFIVFCFLKFDKIEVWMPAT-FLGIYGVYVVTVIILGIYRTHRKKRNLKKKNKELEDF 276

  Fly   239 L-----VGEMTP--------EKRKRLSELERNQAIYTRDME----VEIFERTNSGPNINK-IRYT 285
            |     ....||        |:...:|.|......|::.::    ..:...||:..|.|| .:..
 Worm   277 LSRPSSAASTTPIFGAMKLKEETISVSALFHFMIGYSQFIKNLTRANLKRTTNNNNNDNKNEKRG 341

  Fly   286 TLRMGRSTRISL--DRKATRMVLHNR--------------------------------------- 309
            .:.:|.|...|:  :||.:.:...|.                                       
 Worm   342 IVNLGFSEPYSIPSERKISTIFKQNTFETDLESLESLADLDGSDDEGREEKFGYAHHTVFTSHDQ 406

  Fly   310 -------------ALGRNWGLFKDLFIALRPINCEKWRKGNIIKRAFMLTKIPAVIICCIYIPLV 361
                         ...|:|....|||..|:     .|...:......:..||..||   ..:|:.
 Worm   407 ISLVASEIEEIEITTWRSWDWVWDLFNHLK-----SWPSRDEFSEMNIFIKIVTVI---KVVPVF 463

  Fly   362 DYEL----DKHGWNK---LLNC---IQVMLNPAMSIMAIKALLSSRGNSLWYVAMGEEAI---YA 413
            .::|    ::..|.|   :|:|   ||..|. ::.|:.:|....|.|  ||...:|..||   .|
 Worm   464 FFKLTVPSNEMSWCKPLFILHCFASIQFALF-SIQIITLKPFDGSPG--LWLYGLGFSAILAMVA 525

  Fly   414 MYSLPITVPIAVFMFIQSRTDVPPFYHSVFTVMNLTGSMFMIFICATEIDKVLEVIGHILKVEDD 478
            ||.||:             :....:|..:::.:....|:..|:..:.||..|:.:||.:..:..:
 Worm   526 MYFLPL-------------SKEQKYYKEIYSYLGFLMSIAWIYATSNEIVSVVTMIGVVTGLSME 577

  Fly   479 FMGATVKACTGSLGPLIANVAMALHGYPRMAYASAIGGPFFTVVMSASTVMHVKNLFGLPVSEAN 543
            .:|.|:.|.:..:|.::|::|:...|||:||.|:|||||.|.:::.          ||||.:.|.
 Worm   578 LLGLTIMAWSNCIGDIVADIAVVKQGYPKMAMAAAIGGPLFNLLIG----------FGLPFTIAA 632

  Fly   544 QTGN---------YGLNAFIFLNLGVFSTLLWSTTLGFFARRSVGIFSIVFYCIYLLFAILIHRK 599
            ..|.         |.| ..:||.:.:.:|.:......|..||...:..|..:.::|:|..|....
 Worm   633 AQGKEMELLINPVYRL-LMLFLGISLVTTFVALFIQRFTVRRPHAVLLIFIFVVFLIFICLAEFH 696

  Fly   600 VI 601
            |:
 Worm   697 VL 698

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12376NP_610405.3 PLN03151 33..592 CDD:215604 150/683 (22%)
ncx-9NP_504342.2 PLN03151 68..689 CDD:215604 147/662 (22%)

Return to query results.
Submit another query.