DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12376 and ncx-8

DIOPT Version :9

Sequence 1:NP_610405.3 Gene:CG12376 / 35857 FlyBaseID:FBgn0033323 Length:617 Species:Drosophila melanogaster
Sequence 2:NP_504341.1 Gene:ncx-8 / 182575 WormBaseID:WBGene00003573 Length:703 Species:Caenorhabditis elegans


Alignment Length:703 Identity:153/703 - (21%)
Similarity:275/703 - (39%) Gaps:169/703 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 AFDAEFDNFWDTVSCYAANTFPFEERCAFVASAKDCNRSTNVLPYMRIMACDLNCVNEFEQVIFL 75
            |.:.|....|.:           ||:||::...:|.......|.:...:.|..|.......:|  
 Worm    55 ASECELHKGWTS-----------EEKCAYIKCNQDSCEGGGYLTWSHYVKCQYNIGARVVLII-- 106

  Fly    76 ALFMGLCYEI--LVLLIHVCNKYYSPALKAVSRFLCMNEHVAGVTLLAFGNSSADLFSNLASV-N 137
               :|:.|.|  .|::..:.:.::.|::..:...|.|:|.:||||.|||||.:.|:|.:::|| :
 Worm   107 ---VGIIYLIFLFVVMSTIADDFFCPSISGIVTHLKMSESIAGVTFLAFGNGAPDVFGSISSVLS 168

  Fly   138 ANVPVFANSL----AAALFVSMVSGGLICYTSPFKMNAYESVRDILF----LIFGSMLLQYFLAS 194
            ...|..|.:|    ..::||:.|...:|.:|..||:....::||::|    |.|.:.....|...
 Worm   169 TPKPKAALALGDLFGTSIFVTTVVLAIIIFTKSFKVAIIPTLRDLIFYMITLAFITFCFLKFDKI 233

  Fly   195 SAHVPETSFIVMFLVYIFYILVNVVDVYLIRRALKTTNAQID-------ALLVGEMTPEKRKRLS 252
            ...:|.| |:.::.||:..::  ...:|..||.......|::       |:...|..........
 Worm   234 EVWMPAT-FLGIYAVYLLTVI--AFSIYRTRRKNLKKKKQLESEKDDESAISRPESVASNMPICE 295

  Fly   253 ELERNQAIYTRDMEVEI--------------FERTNSGPNINKIRYTTLRMGRSTRISLDR---K 300
            :||:.    |..|.|..              ..|||...:|...:...:..|.|..:..|.   |
 Worm   296 KLEKK----TESMSVSTLFHVMVGLSRFMKKLNRTNKIQSIENKKQGFVNEGFSESLDADELTLK 356

  Fly   301 ATRM---VLHNRAL--------------------------------------------------- 311
            ..||   :..|:.|                                                   
 Worm   357 RNRMISLIFRNKTLDTDLESMKTLDEMESSDDEGREEEFAYAHHTVFTSHDQMSLAATEFEFREL 421

  Fly   312 ----GRNWGLFKDLFIALRP-INCEKWRKGNIIKRAFMLTKIPAVIICCIYIPLVDYELDKHGWN 371
                .|:|.:  ||...|:| .:.|::.:.||..:..|:.:|.......:.||     .::..|.
 Worm   422 TTWRSRDWII--DLLYHLKPWPSREEFSEMNIFVKIIMIIRIIPSFFMKMTIP-----SNEMSWC 479

  Fly   372 K---LLNC---IQVMLNPAMSIMAIKALLSSRGNSLWYVAMGEEAIYAMYSLPITVPIAV--FMF 428
            |   ||:|   ||..|. ::.|:.:|....|.|  ||           :|.|..:..||:  ..|
 Worm   480 KPLFLLHCFASIQFALF-SIQIINLKPFDGSPG--LW-----------LYGLAFSATIALLALCF 530

  Fly   429 IQSRTDVPPFYH-SVFTVMNLTGSMFMIFICATEIDKVLEVIGHILKVEDDFMGATVKACTGSLG 492
            :....::.  || .|::.:....|:..|:..|.||..|:.::|.:..:..:.:|.||.:.:..:|
 Worm   531 LPLNKELK--YHKEVYSYLGFLMSIAWIYATANEIISVMTMVGVVTGLSQELLGLTVMSWSDCIG 593

  Fly   493 PLIANVAMALHGYPRMAYASAIGGPFFTVVMSASTVMHVKNLFGLPVSEANQTGN---------Y 548
            .::|::|:...|||:||.|:|||||.|.:::.          ||||.:.|:..|.         |
 Worm   594 DIVADIAVIKQGYPKMAMAAAIGGPLFNLLIG----------FGLPFTIASAQGKQIDLIINPVY 648

  Fly   549 GLNAFIFLNLGVFSTLLWSTTLGFFARRSVGIFSIVFYCIYLLFAILIHRKVI 601
            .: ..:||.:.:.:|.:......|..|....:..|..:..:::|..|....|:
 Worm   649 RI-LLLFLGISLVTTFVALFIERFTVRWPHAVALIFIFINFVIFVCLAEFHVL 700

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12376NP_610405.3 PLN03151 33..592 CDD:215604 147/670 (22%)
Na_Ca_ex 85..219 CDD:279963 40/144 (28%)
Na_Ca_ex 448..595 CDD:279963 39/155 (25%)
ncx-8NP_504341.1 PLN03151 61..628 CDD:215604 136/622 (22%)
Na_Ca_ex 107..253 CDD:279963 42/146 (29%)
Na_Ca_ex 544..681 CDD:279963 37/147 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165701
Domainoid 1 1.000 75 1.000 Domainoid score I5893
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41602
Inparanoid 1 1.050 162 1.000 Inparanoid score I2840
Isobase 1 0.950 - 0 Normalized mean entropy S4675
OMA 1 1.010 - - QHG57812
OrthoDB 1 1.010 - - D257493at33208
OrthoFinder 1 1.000 - - FOG0000933
OrthoInspector 1 1.000 - - mtm4752
orthoMCL 1 0.900 - - OOG6_101277
Panther 1 1.100 - - O PTHR12266
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1775
SonicParanoid 1 1.000 - - X612
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1716.750

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