DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12376 and ncx-6

DIOPT Version :9

Sequence 1:NP_610405.3 Gene:CG12376 / 35857 FlyBaseID:FBgn0033323 Length:617 Species:Drosophila melanogaster
Sequence 2:NP_499146.2 Gene:ncx-6 / 182354 WormBaseID:WBGene00003571 Length:590 Species:Caenorhabditis elegans


Alignment Length:616 Identity:164/616 - (26%)
Similarity:267/616 - (43%) Gaps:141/616 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 ERCAFVASAKDCNRSTNVLPYMRIMAC-DLNCVN-------------EFEQVIFLALFMGLCYEI 85
            |:|...|..    .||.|..|::   | |.||..             ....|..:.:..|:.| :
 Worm    51 EQCTIQAGW----NSTQVCEYVK---CNDDNCEGGGYVLWTRYVECASSPAVRIILIITGVIY-M 107

  Fly    86 LVLLIHV---CNKYYSPALKAVSRFLCMNEHVAGVTLLAFGNSSADLFSNLASVNANVPVFANSL 147
            |||.|.|   .:.::||::.::...|.::|.|||||.:||||.:.|:|..:|||.:: |.....|
 Worm   108 LVLFIMVSSAADDFFSPSISSIVAHLRISESVAGVTFMAFGNGAPDVFGAIASVLSS-PTPKADL 171

  Fly   148 A------AALFVSMVSGGLICYTSPFKMNAYESVRDILFLIFGSMLLQYFLASSAHVPETSFIVM 206
            |      |.|||:.:...:..:|.|||...:.|:|||.|.:.....|.:......|| |....:.
 Worm   172 ALGELFGAGLFVTTMVLAVTIFTRPFKAEVFSSIRDIAFYLVALAFLAFCFVYYDHV-EIWMPIT 235

  Fly   207 FL-VYIFYILVNVVDVYLIRRALKTTNAQIDALLVGEMTPEKRKRLSELERNQAIYT-------- 262
            || ||:.|:...::...|..|..|      |...|.|:   |......||.:..||.        
 Worm   236 FLGVYLIYVCTVILSQILHNRHKK------DEEKVDEV---KTVDTDSLEDDDDIYVSHGHHVLH 291

  Fly   263 ------RDMEVEIFERTNSGPNINKIRYTTLRMGRSTRISLDRKATRMVLHNRALGRNWGLFKDL 321
                  .:.|:|..|                        .|...:.|.|:|:         ||: 
 Worm   292 AHEVMKMEAEIEAVE------------------------PLKTWSFRGVVHD---------FKE- 322

  Fly   322 FIALRP-INCEKWRKGNIIKRAF-MLTKIPAVIICCIYIPLVDYELDKHGWNKLLNCIQVMLNPA 384
              .|:| .:.::|.:.||.::.. :|..||..:. .:.||     ..:..|:|.:..:|.::.|.
 Worm   323 --HLKPWPSMDEWDEMNIFQKVIAVLNTIPNFLF-KLTIP-----HSEQPWSKPITLLQCLICPV 379

  Fly   385 MSIMAIKAL-LSSRGNS--LWYVAMGEEAIYAMYSLPITVPI--AVFMFIQSRTDVPPFYHSVFT 444
            ..:..|:.. :|...||  ||           ||.|.::|.:  ||..|.:...: ||||.|:.:
 Worm   380 FLLFCIQVCSISPFPNSPGLW-----------MYGLILSVLLTAAVLFFTELHKE-PPFYKSLIS 432

  Fly   445 VMNLTGSMFMIFICATEIDKVLEVIGHILKVEDDFMGATVKACTGSLGPLIANVAMALHGYPRMA 509
            ......|:..|::.::|:..|:.::|.:.:|..:.:|.|:.|.:.|:|.|||:|::|..||||||
 Worm   433 YAGFLMSIAWIYLISSEVVNVVTMLGVVSRVSHEVLGLTILAWSNSIGDLIADVSVAKQGYPRMA 497

  Fly   510 YASAIGGPFFTVVMSASTVMHVKNLFGLPVSEANQTG---------NYGLNAFIFLNLGVFSTLL 565
            .|:||||..|.:::.          ||||.:.|...|         .|.| ..:||.:.:..||:
 Worm   498 MAAAIGGQLFNLLIG----------FGLPFTIAKIQGKSISMIINPTYRL-LMLFLAISLIFTLI 551

  Fly   566 WSTTLGFFARRSVGIFSIVFYCIYLLFAILI 596
            ......:|.|| :..:|:||  ||:.|.:.|
 Worm   552 AMFAQKYFLRR-IHSYSLVF--IYISFFVFI 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12376NP_610405.3 PLN03151 33..592 CDD:215604 162/610 (27%)
Na_Ca_ex 85..219 CDD:279963 48/143 (34%)
Na_Ca_ex 448..595 CDD:279963 49/155 (32%)
ncx-6NP_499146.2 Na_Ca_ex 105..249 CDD:279963 49/146 (34%)
Na_Ca_ex 431..579 CDD:279963 49/161 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165710
Domainoid 1 1.000 75 1.000 Domainoid score I5893
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H41602
Inparanoid 1 1.050 162 1.000 Inparanoid score I2840
Isobase 1 0.950 - 0 Normalized mean entropy S4675
OMA 1 1.010 - - QHG57812
OrthoDB 1 1.010 - - D257493at33208
OrthoFinder 1 1.000 - - FOG0000933
OrthoInspector 1 1.000 - - mtm4752
orthoMCL 1 0.900 - - OOG6_101277
Panther 1 1.100 - - O PTHR12266
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1775
SonicParanoid 1 1.000 - - X612
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.750

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