DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12376 and LOC1269838

DIOPT Version :10

Sequence 1:NP_610405.3 Gene:CG12376 / 35857 FlyBaseID:FBgn0033323 Length:617 Species:Drosophila melanogaster
Sequence 2:XP_308489.5 Gene:LOC1269838 / 1269838 VectorBaseID:AGAMI1_007059 Length:572 Species:Anopheles gambiae


Alignment Length:601 Identity:135/601 - (22%)
Similarity:252/601 - (41%) Gaps:97/601 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 CYAANTFPFEERCAFVASAKDCNRSTNVLPYMRIMACDLNCVNEFEQVIFLALFMGLCYEILV-- 87
            |...::...:|||.||...::|..|.:.|.||..:.|   .|:....::|.:..:.|...:|:  
Mosquito    33 CSNVHSVLADERCLFVRETEECRESMHYLDYMHFVYC---IVDSSNLLLFASAIVALLLFVLLLG 94

  Fly    88 -LLIHVCNKYYSPALKAVSRFLCMNEHVAGVTLLAFGNSSADLFSNL---ASVNANVPVFANSLA 148
             |:.|:|...|..::..|::...:||::||||||.:||..|.:.|.|   .|.:..: ::...|.
Mosquito    95 TLIYHLCVTRYVDSVLYVAKSWRLNEYIAGVTLLTYGNGLAQVLSELKHHTSGDTEL-IYNQYLG 158

  Fly   149 AALFVSMVSGGLICYTSPFKMNAYESVRDILFLIFGSMLLQYFLASS--AHVPETSFIVMFLVYI 211
            .|::.......|:.:|..|.:.....|.:::.|:..|:|::.|:...  ..|..|:..|::|.::
Mosquito   159 TAVYQVSFLAALVIWTGSFAIYPEVIVPNLISLMIVSLLVEEFMYDEQVGIVQTTTLGVLYLAFL 223

  Fly   212 --FYILVNVVDVYLIRRALKTTNAQIDALLVGEMTPEKRKRLSELERNQAIYTRDMEVEIFERTN 274
              .|....|:|...||     :.:|||                         .||.:.::|:.. 
Mosquito   224 GALYTTARVMDREGIR-----SRSQID-------------------------IRDADGKVFDTE- 257

  Fly   275 SGPNINKIRYTTLRMGRSTRISLDRKATRMVLHNRALGRNWGLFKDLFIALRPINCEKWRKGNII 339
                      .|..:|     ::|::.:          .:|  .:.::..||....|.:|.....
Mosquito   258 ----------LTATVG-----NVDQEQS----------ASW--LEHVWQGLRTFREEDFRAAPWY 295

  Fly   340 KRAFMLTKIPAVIICCIYIPLVDYELDKHGWNKLLNCIQVMLNPAMSI-MAIKALLSSRGNSLWY 403
            ::.::|..||..::..:.:|.|::.|..|||||.|..:.::|.|...| .|:..::||  .:|.:
Mosquito   296 RQVYLLCSIPVEVVAVLLLPKVNFALPLHGWNKCLFIVNLILFPLFLIGTALVDMISS--ENLGW 358

  Fly   404 VAMGEEAIYAMYSLPITVPIAVFMFIQSRTDV----PPFYHSVFTVMNL---TGSMFMIFICATE 461
            :.:|.           .:..|.|..|...|..    |||    ||.:.|   .|:.::|.:.:.|
Mosquito   359 ICLGS-----------LIGSACFSVIVCSTSCYDRKPPF----FTCIGLFAIFGTSYVIMLLSYE 408

  Fly   462 IDKVLEVIGHILKVEDDFMGATVKACTGSLGPLIANVAMALHGYPRMAYASAIGGPFFTVVMSAS 526
            :..:||.:..|..|.......|:.|.......||....:|:.||.|:.:|:.:|.|.|.:::...
Mosquito   409 LIAILEALSIIANVSSASFAITILAWGSCWIDLITLRTLAVRGYSRIGFAACLGAPVFNILIGLC 473

  Fly   527 TVMHVKNLFGLPVSEANQTGNYGLNAFIFLNLGVFSTLLWSTTLGFFARRSVGIFSIVFYCIYLL 591
            ||..|:.:.........:.|..|....|:|.:...:.||......|.||:|:.......|..:|.
Mosquito   474 TVFCVQMIRSGTTQIHVRDGTSGPTCAIYLFVTSMTILLSVLFTRFEARKSIAFCLTTLYVTFLA 538

  Fly   592 FAILIHRKVIHSFSVD 607
            :......:|.|.:..|
Mosquito   539 YVAFCEFEVTHGYGTD 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12376NP_610405.3 PLN03151 33..592 CDD:215604 131/576 (23%)
LOC1269838XP_308489.5 None

Return to query results.
Submit another query.