DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12376 and slc24a4

DIOPT Version :9

Sequence 1:NP_610405.3 Gene:CG12376 / 35857 FlyBaseID:FBgn0033323 Length:617 Species:Drosophila melanogaster
Sequence 2:XP_002933272.2 Gene:slc24a4 / 100489343 XenbaseID:XB-GENE-478288 Length:612 Species:Xenopus tropicalis


Alignment Length:635 Identity:139/635 - (21%)
Similarity:231/635 - (36%) Gaps:200/635 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 NC----VNEFEQVIF--------LALFMGLC--YEILVLLIHVCNKYYSPALKAVSRFLCMNEHV 114
            ||    :|||...:|        ..||...|  |....|.| ||:.::.|:|:.:...|.::|.|
 Frog    83 NCTEPAINEFPDDLFSIKERQRGAVLFHIFCALYMFYALAI-VCDDFFVPSLEKICEKLHLSEDV 146

  Fly   115 AGVTLLAFGNSSADLFSNLASV---NANVPVFANSLAAALF-------VSMVSGGLICYTSPFKM 169
            ||.|.:|.|:|:.:||:::..|   :.:|.| ...:.:|:|       |..|..|.:     .::
 Frog   147 AGATFMAAGSSTPELFASVIGVFITHGDVGV-GTIVGSAVFNILCIIGVCGVFAGQV-----VRL 205

  Fly   170 NAYESVRDILFLIFGSMLLQYFLASSAHVPETSFIVMFLVYIFYILV---------------NVV 219
            ..:...||.::.|...:.|..|:.....|...| :::.::|.||||:               ||.
 Frog   206 TWWSLFRDSMYYIISILALIIFIYDEIIVWWES-LILIVMYFFYILIMKYNTKMQRLFTIKKNVG 269

  Fly   220 DVYLIRRALKTTNAQIDALLVGEMTPEKRKRLSELERNQAIYTRDMEVEIFERTNSGPNINKIRY 284
            :...:...|:..|...|.:......|    .|.:::.:|..|.|:..|.:.|...|.|  .|.|:
 Frog   270 NGCPVGSELQDGNVYSDFVCDDPSVP----LLWKVKASQQYYNRNSVVMVDEIICSSP--PKYRF 328

  Fly   285 --------TTLRMGRSTRISLDRKATRMVLHNR-------------------ALGRNWGLFKD-- 320
                    .|.:....||:   |.|:|::::.|                   .|..|.||..|  
 Frog   329 PEAGLRIMITNKFPPRTRL---RMASRLIINERQRLLHSANGTSTTTLDGKQELLENGGLHVDKA 390

  Fly   321 -----------LFIALRPINCEKWRKGNIIKRAFMLTKIPAVIICCIYIPLVDYELDKHGWNKLL 374
                       |.....|..|     .||.|.||...     :||.:|..:.:  ..|..|....
 Frog   391 DDYQEENEANYLVPFSVPSGC-----ANIFKWAFSWP-----LICILYFTIPN--CSKPRWENFF 443

  Fly   375 NCIQVMLNPAMSIMAIKALLSSRGNSLWYVAMGEEAIYAMYSLPITVPIAVFMFIQSRTDVPPFY 439
                              :|:...::||                    ||:|.:|          
 Frog   444 ------------------MLTFITSTLW--------------------IAIFSYI---------- 460

  Fly   440 HSVFTVMNLTGSMFMIFICATEIDKVLEVIGHILKVEDDFMGATVKACTGSLGPLIANVAMALHG 504
                          |::        ::.|||:.|.:.|..||.|..|...|:...:|::.:|..|
 Frog   461 --------------MVW--------MVTVIGYTLGIPDVIMGITFLAAGTSVPDCMASLIVARQG 503

  Fly   505 YPRMAYASAIGGPFFTVVMSASTVMHVKNLFGLPVSEANQTGNYGLNAFIFLNLGVFST--LLWS 567
            ...||.:::||...|.:::.          .|:|........|||....|.....|:|.  ||.|
 Frog   504 LGDMAVSNSIGSNVFDILVG----------LGVPWGLQTMIINYGSTVKINSKGLVYSVILLLGS 558

  Fly   568 TTL---GFFAR-----RSVGIFSIVFYCIYLLFAILIHRKVIHSFSVDLP 609
            ..|   |.:..     :..|.:.:..|.|:|.|::||...|. :| |:||
 Frog   559 VALTVGGIYVNKWKLDKKFGFYVLFLYAIFLCFSVLIEYNVF-TF-VNLP 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12376NP_610405.3 PLN03151 33..592 CDD:215604 131/616 (21%)
Na_Ca_ex 85..219 CDD:279963 38/158 (24%)
Na_Ca_ex 448..595 CDD:279963 37/156 (24%)
slc24a4XP_002933272.2 2A1904 <91..596 CDD:273344 130/613 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1775
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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