DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8584 and ctdsp2

DIOPT Version :10

Sequence 1:NP_610404.1 Gene:CG8584 / 35856 FlyBaseID:FBgn0033322 Length:293 Species:Drosophila melanogaster
Sequence 2:NP_955838.1 Gene:ctdsp2 / 321465 ZFINID:ZDB-GENE-030131-184 Length:258 Species:Danio rerio


Alignment Length:182 Identity:65/182 - (35%)
Similarity:102/182 - (56%) Gaps:16/182 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 GRKTLVLDLDETLVHSCYLDPDTHDNVGCSQLPEHAQPDYVLNISIDGMEPIVFRVFKRPHVDEF 158
            |:..:|:|||||||||.:              ...:..|:::.:.|:|....|: |.|||:||||
Zfish    87 GKICVVIDLDETLVHSSF--------------KPISNADFIVPVEIEGTTHQVY-VLKRPYVDEF 136

  Fly   159 LDFVSKWYDLVIYTASLEVYAAQVVDHLDAGRGLITRRFYRQHCRASSPMVSKDLTLVTPDMSGV 223
            |..:.:.::.|::||||..||..|.|.||. .|:...|.:|:.|........|||:.:..::...
Zfish   137 LQRMGELFECVLFTASLAKYADPVTDLLDQ-CGVFRTRLFRESCVFYQGCYVKDLSRLGRELHKT 200

  Fly   224 LIIDNSPYAYRDFPDNAIPIKTFIYDPDDTELLKMLPFLDALRFTKDVRSIL 275
            ||:||||.:|...|:||:|:.::..|.:|||||.::|..:.|...:||.|.|
Zfish   201 LILDNSPASYIFHPENAVPVLSWFDDSEDTELLHLIPVFEELSQAEDVYSRL 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8584NP_610404.1 HIF-SF_euk 95..270 CDD:274055 60/174 (34%)
ctdsp2NP_955838.1 HIF-SF_euk 88..247 CDD:274055 60/174 (34%)

Return to query results.
Submit another query.