DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8738 and Jon99Cii

DIOPT Version :10

Sequence 1:NP_610403.1 Gene:CG8738 / 35855 FlyBaseID:FBgn0033321 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_524554.1 Gene:Jon99Cii / 43544 FlyBaseID:FBgn0003356 Length:265 Species:Drosophila melanogaster


Alignment Length:247 Identity:62/247 - (25%)
Similarity:109/247 - (44%) Gaps:34/247 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 NGESVF-AEFPWMVALM-DMEGNFVCGGTLIHPQLVLTSAHNVFNRSEDSLLVRAGDWDLNSQTE 267
            ||...: .:.|::|.|: ...||:.|||::|....|||:||.....|..::     ::..:.:|:
  Fly    38 NGYPAYEGKVPYIVGLLFSGNGNWWCGGSIIGNTWVLTAAHCTNGASGVTI-----NYGASIRTQ 97

  Fly   268 LHPYQMRAISELHRHENFNNLTLYNDIALVVLERPFQVAPHIQPICL-PPPETPQMEAELRSAS- 330
            ..........::.:|.::|:..|:|||:|:       ..||:....| ...|.|......:..: 
  Fly    98 PQYTHWVGSGDIIQHHHYNSGNLHNDISLI-------RTPHVDFWSLVNKVELPSYNDRYQDYAG 155

  Fly   331 --CLATGWGLRYSTSRTMENLLKRIELPAVDHESCQRLLRHTVLGRRYNLHPSFTCAGGVKGKDT 393
              .:|:|||..|..| .:.:.|:.:::..:....|         .|.::||.:..|.....||.|
  Fly   156 WWAVASGWGGTYDGS-PLPDWLQSVDVQIISQSDC---------SRTWSLHDNMICINTDGGKST 210

  Fly   394 CMGDGGSPLFCTLPGQKDRYQLVGLVSWGIEC-AEKDVPAAYTNVAYLRNWI 444
            |.||.|.||.     ..|..:|||:.|:|... .:...||.::.|....:||
  Fly   211 CGGDSGGPLV-----THDGNRLVGVTSFGSAAGCQSGAPAVFSRVTGYLDWI 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8738NP_610403.1 CLIP_1 112..163 CDD:465709
Tryp_SPc 207..447 CDD:238113 60/245 (24%)
Jon99CiiNP_524554.1 Tryp_SPc 36..260 CDD:238113 62/247 (25%)
Blue background indicates that the domain is not in the aligned region.

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