DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8738 and psh

DIOPT Version :10

Sequence 1:NP_610403.1 Gene:CG8738 / 35855 FlyBaseID:FBgn0033321 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_573297.1 Gene:psh / 32832 FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster


Alignment Length:277 Identity:79/277 - (28%)
Similarity:113/277 - (40%) Gaps:58/277 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 GYSNPKGLYYQLDGYNNGESVFAEFPWMVAL--MDMEGNFVCGGTLIHPQLVLTSAHNVFNRSED 251
            ||....|:|                |.|.|:  :....:|.|||:||..:.|||:||.|...:..
  Fly   147 GYPVDPGVY----------------PHMAAIGYITFGTDFRCGGSLIASRFVLTAAHCVNTDANT 195

  Fly   252 SLLVRAGDWDLNSQTELHPYQMRAISELHRHENFNNLTLYNDIALVVLERPFQVAPHIQPICL-- 314
            ...||.|  .:|.:...|.||...|..:..|..:.. ..|||||::.|||......:|:|.||  
  Fly   196 PAFVRLG--AVNIENPDHSYQDIVIRSVKIHPQYVG-NKYNDIAILELERDVVETDNIRPACLHT 257

  Fly   315 ---PPPETPQMEAELRSASCLATGWGLRYSTSRTMENLLKRIELPAVDHESCQ----------RL 366
               .||.         ::.....|||:...|:|....:|.|..|..|..:.|.          ||
  Fly   258 DATDPPS---------NSKFFVAGWGVLNVTTRARSKILLRAGLELVPLDQCNISYAEQPGSIRL 313

  Fly   367 LRHTVLGRRYNLHPSFTCAGGVKGK---DTCMGDGGSPLFCTLPGQKDRYQLVGLVSWGIECAEK 428
            |:..|:       .|..||  :..|   |.|.||.|.||...|..:...|.::|::|.|..||..
  Fly   314 LKQGVI-------DSLLCA--IDQKLIADACKGDSGGPLIHELNVEDGMYTIMGVISSGFGCATV 369

  Fly   429 DVPAAYTNVAYLRNWID 445
             .|..||.|:...::|:
  Fly   370 -TPGLYTRVSSYLDFIE 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8738NP_610403.1 CLIP_1 112..163 CDD:465709
Tryp_SPc 207..447 CDD:238113 75/259 (29%)
pshNP_573297.1 CLIP 30..79 CDD:197829
Tryp_SPc 144..387 CDD:238113 79/277 (29%)
Blue background indicates that the domain is not in the aligned region.

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