| Sequence 1: | NP_523661.2 | Gene: | ptc / 35851 | FlyBaseID: | FBgn0003892 | Length: | 1286 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_038952062.1 | Gene: | Ptch1 / 89830 | RGDID: | 621425 | Length: | 1495 | Species: | Rattus norvegicus |
| Alignment Length: | 1360 | Identity: | 492/1360 - (36%) |
|---|---|---|---|
| Similarity: | 724/1360 - (53%) | Gaps: | 187/1360 - (13%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 44 GKARGSRTAIYLR--SVFQSHLETLGSSVQKHAGKVLFVAILVLSTFCVGLKSAQIHSKVHQLWI 106
Fly 107 QEGGRLEAELAYTQKTIGEDESATHQLLIQTTHDPNASVLHPQALLAHLEVLVKATAVKVHLYDT 171
Fly 172 EWGLRDMCNMPSTPSFEGIYYIEQILRHLIPCSIITPLDCFWEGSQLLGPESAVVIPGLNQRLLW 236
Fly 237 TTLNPASVMQYMKQKMSEEKISFDFETVEQYMKRAAIGSGYMEKPCLNPLNPNCPDTAPNKNSTQ 301
Fly 302 PPDVGAILSGGCYGYAAKHMHWPEELIVGGAKRNRSGHLRKAQALQSVVQLMTEKEMYDQWQDNY 366
Fly 367 KVHHLGWTQEKAAEVLNAWQRNFSREVEQLLRKQSRIATNYDIYVFSSAALDDILAKFSHPSALS 431
Fly 432 IVIGVAVTVLYAFCTLLRWRDPVRGQSSVGVAGVLLMCFSTAAGLGLSALLGIVFNAASTQVVPF 496
Fly 497 LALGLGVDHIFMLTAAYAES--NRR----EQTKLILKKVGPSILFSACSTAGSFFAAAFIPVPAL 555
Fly 556 KVFCLQAAIVMCSNLAAALLVFPAMISLDLRRRTAGRADIFCC----CF-------PVWKEQP-- 607
Fly 608 --KVAPPVLPLNNNNGRGARH-------------------------PKS------CNNNRVPLPA 639
Fly 640 QNP--------LLEQRADIPGSSHSL----ASFSLATFAFQHYTPFLMRSWVKFLTVMGFLAALI 692
Fly 693 SSLYASTRLQDGLDIIDLVPKDSNEHKFLDAQTRLFGFYSMYAVTQGNFEYPTQQQLLRDYHDSF 757
Fly 758 VRVPHVIKNDNGGLPDFWLLLFSEWLGNLQKIFDEEYRDGRLTKECWFPNASSDAILAYKLIVQT 822
Fly 823 GHVDNPVDKELVLTNRLVNSDGIINQRAFYNYLSAWATNDVFAYGASQGKLYPEPRQYFHQPNEY 887
Fly 888 ----DLKIPKSLPLVYAQMPFYLHGLTDTSQIKTLIGHIRDLSVKYEGFGLPNYPSGIPFIFWEQ 948
Fly 949 YMTLRSSLAMILACVLLAALVLVSLLLLSVWAAVLVILSVLASLAQIFGAMTLLGIKLSAIPAVI 1013
Fly 1014 LILSVGMMLCFNVLISLGFMTSVGNRQRRVQLSMQMSLGPLVHGMLTSGVAVFMLSTSPFEFVIR 1078
Fly 1079 HFCWLLLVVLCVGACNSLLVFPILLSMVGPEAELVPLEHPDRISTPSPLP----VRSSKRSGKSY 1139
Fly 1140 VVQGSRSSRGSCQKS---------HHHHHKDLNDPS---LTTITEEPQSWKSS------------ 1180
Fly 1181 NSSIQ--------MPNDWTYQPREQRPASYAAPPPAYHKAAAQQ--HHQHQGPPT---------- 1225
Fly 1226 --TPPPPFPTAYPPELQSIVVQPEVTVETTHSDSNTTKVTATANIKVEL---AMPGRAVR 1280 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| ptc | NP_523661.2 | 2A060602 | 17..1134 | CDD:273338 | 449/1163 (39%) |
| MMPL | 454..598 | CDD:304422 | 77/149 (52%) | ||
| Ptch1 | XP_038952062.1 | 2A060602 | 178..1253 | CDD:273338 | 437/1125 (39%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C166348809 | |
| Domainoid | 1 | 1.000 | 297 | 1.000 | Domainoid score | I1416 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG1935 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H223 | |
| Inparanoid | 1 | 1.050 | 859 | 1.000 | Inparanoid score | I407 |
| OMA | 1 | 1.010 | - | - | QHG49297 | |
| OrthoDB | 1 | 1.010 | - | - | D1190129at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0003078 | |
| OrthoInspector | 1 | 1.000 | - | - | oto96833 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_105508 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR46022 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X2446 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 16 | 15.770 | |||||