DRSC/TRiP Functional Genomics Resources

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Protein Alignment ptc and PTCHD4

DIOPT Version :9

Sequence 1:NP_523661.2 Gene:ptc / 35851 FlyBaseID:FBgn0003892 Length:1286 Species:Drosophila melanogaster
Sequence 2:XP_016866380.1 Gene:PTCHD4 / 442213 HGNCID:21345 Length:904 Species:Homo sapiens


Alignment Length:1165 Identity:217/1165 - (18%)
Similarity:391/1165 - (33%) Gaps:380/1165 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 LRSVFQSHLETLGSSVQKHAGKVLFVAILVLSTFCVGLKS----------AQIHSKVHQLWIQEG 109
            ||...||....||..|.:|  .|.|:.:..:.|...||.:          .::.:..|.|     
Human    23 LRRGLQSFCHRLGLCVSRH--PVFFLTVPAVLTITFGLSALNRFQPEGDLERLVAPSHSL----- 80

  Fly   110 GRLEAELAYTQKTIGEDESATHQLLIQTTHDPNASVLHPQALLAHLEVLVKATAVKVHLYDTEWG 174
            .::|..||.:...:.:.:|..:            |.||.......: :|:..|...:.|      
Human    81 AKIERSLASSLFPLDQSKSQLY------------SDLHTPGRYGRV-ILLSPTGDNILL------ 126

  Fly   175 LRDMCNMPSTPSFEGIYYIEQILRHLIPCSIITPLDCFWEGSQLLGPESAVVIPGLNQRLLWTTL 239
                       ..|||                            |....||:...:|.:....|.
Human   127 -----------QAEGI----------------------------LQTHRAVLEMKVNHKGYNYTF 152

  Fly   240 NPASVMQYMKQKMSEEKISFDFETVEQYMKRAAIGSGYMEKPCLNPLNPNCPDTAPNKNSTQPPD 304
            :...|::...:|.    :..|..:|.:.:::||:.:....:..:...|....|   .:||.....
Human   153 SHLCVLRNQDKKC----VLDDIISVLEDLRQAAVSNKTTARVQVRYPNTKLKD---GRNSFIGHQ 210

  Fly   305 VGAILSGGCYGYAAKHMHWPEELIVGGAKRNRSGHLRKAQALQSVVQLMTEKEMYDQWQDNYKVH 369
            :|.::.                  |..:|..|   ::.|:|:|....|.|               
Human   211 LGGVVE------------------VPNSKDQR---VKSARAIQITYYLQT--------------- 239

  Fly   370 HLGWTQEKAAEVLNAWQRNFSREVEQLLRKQSRIATNYDIYVFSSAAL------DDILAKFSHPS 428
            :...||:...|   .|:..|.:    |:||.........:|..:|.:|      ..|||:     
Human   240 YGSATQDLIGE---KWENEFCK----LIRKLQEEHQELQLYSLASFSLWRDFHKTSILAR----- 292

  Fly   429 ALSIVIGVAVTVLYAFCTLLRWRDPVRGQSSVGVAGVLLMCFS--TAAGLGL-------SALLGI 484
              |.|:...|.:|.........:|.:|.:..:|:.|||.:|.|  ||||:..       |.||||
Human   293 --SKVLVSLVLILTTATLSSSMKDCLRSKPFLGLLGVLTVCISIITAAGIFFITDGKYNSTLLGI 355

  Fly   485 VFNAASTQVVPFLALGLGVDHIFMLTAAYAESNRREQTKLILKKVGPSILFSACSTAGSFF---- 545
                      ||.|:|.|...:|.|.:.:..:......|..:......::.:...|:..:|    
Human   356 ----------PFFAMGHGTKGVFELLSGWRRTKENLPFKDRIADAYSDVMVTYTMTSSLYFITFG 410

  Fly   546 --AAAFIPVPALKVFCLQAAIVMCSN------LAAALLVFPAMISLDLRRRTAGRAD------IF 596
              |:.|..:.|:||||....:.:..|      ...:.|||            ||:.:      ||
Human   411 MGASPFTNIEAVKVFCQNMCVSILLNYFYIFSFFGSCLVF------------AGQLEQNRYHSIF 463

  Fly   597 CCCF---------PVWKEQPKVAPPVLPLNNNNGRGARHPKSCNNNRVPLPAQNPLLEQRADIPG 652
            ||..         |||.:        ..:::.:.:.:.|..:        |.|:..::.      
Human   464 CCKIPSAEYLDRKPVWFQ--------TVMSDGHQQTSHHETN--------PYQHHFIQH------ 506

  Fly   653 SSHSLASFSLATFAFQHYTPFLMRSWVKFLTVMGFLAALISSLYASTRLQDGLDIIDLVPKDSNE 717
                        |..:||..::...:||...|:.:|.....|.....::.||.:||:|:..||..
Human   507 ------------FLREHYNEWITNIYVKPFVVILYLIYASFSFMGCLQISDGANIINLLASDSPS 559

  Fly   718 HKFLDAQTRLFGFYSMYAVTQGNFEY--------PTQQQLLR-----------DYHDSFVRVPHV 763
            ..:...|.:   ::|.|:...|.:.|        ..|..|.|           :.:..|::|.:|
Human   560 VSYAMVQQK---YFSNYSPVIGFYVYEPLEYWNSSVQDDLRRLCSGFTAVSWVEQYYQFLKVSNV 621

  Fly   764 IKNDNGGLPDFWLLLFSEWLGNLQKIFDEEYRDGRLTKECWFPNASSDAILAYKLIVQTGHVDNP 828
            ..|:.           |:::..||..|         .|:..|.:..:|.|.:     :.|     
Human   622 SANNK-----------SDFISVLQSSF---------LKKPEFQHFRNDIIFS-----KAG----- 656

  Fly   829 VDKELVLTNRLVNSDGIINQRAFYNYLSAWATNDVFAYGASQGKLYPEPRQYFHQPNEYDLKIPK 893
             |:..::.:||              ||.|..:.|                    :..|....:.|
Human   657 -DESNIIASRL--------------YLVARTSRD--------------------KQKEITEVLEK 686

  Fly   894 SLPLVYAQMPFYLHGLTDTSQIKTLIGHIRDLSVKYEGFGLPNYPSGIPFIFWEQYMTLRSSLAM 958
            ..||..::                        |:::..|.    ||   |:|.:.|....:...:
Human   687 LRPLSLSK------------------------SIRFIVFN----PS---FVFMDHYSLSVTVPVL 720

  Fly   959 ILACVLLAALVLVSLLLLSVWAAVLVILSVLASLAQIFGAMTLLGIKLSAIPAVILILSVGMML- 1022
            |....:|..|:|...|::.......:||||.:....:.|.|||..:.:..|..:.||.::...: 
Human   721 IAGFGVLLVLILTFFLVIHPLGNFWLILSVTSIELGVLGLMTLWNVDMDCISILCLIYTLNFAID 785

  Fly  1023 -CFNVLISLGFMTSVGNRQRRVQLSMQMSLGPLVHG-MLTSGVAVFMLSTSPFEFVIRHFCWLLL 1085
             |..:|.:....|. ..|.:.::.|:|      .|| .:...|..|::...|..||..:..:.|.
Human   786 HCAPLLFTFVLATE-HTRTQCIKSSLQ------DHGTAILQNVTSFLIGLVPLLFVPSNLTFTLF 843

  Fly  1086 -VVLCVGACNSL---LVFPILLSMVGP-----------------EAELVPL-EHPDRIST 1123
             .:|..|.|..|   ::.|:.|:...|                 |.|.:.: |:||.::|
Human   844 KCLLLTGGCTLLHCFVILPVFLTFFPPSKKHHKKKKRAKRKEREEIECIEIQENPDHVTT 903

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ptcNP_523661.2 2A060602 17..1134 CDD:273338 217/1165 (19%)
MMPL 454..598 CDD:304422 41/170 (24%)
PTCHD4XP_016866380.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165154925
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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