DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ptc and Disp2

DIOPT Version :9

Sequence 1:NP_523661.2 Gene:ptc / 35851 FlyBaseID:FBgn0003892 Length:1286 Species:Drosophila melanogaster
Sequence 2:NP_001101229.2 Gene:Disp2 / 311324 RGDID:1309569 Length:1346 Species:Rattus norvegicus


Alignment Length:1347 Identity:257/1347 - (19%)
Similarity:415/1347 - (30%) Gaps:486/1347 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 GRLEAELAYTQKTIGEDESATHQLLIQTTHDPNASVLHPQALLAHLEVLVKATAVKVHLYDTEWG 174
            ||.|..:..|::.:|.         ::...:.|.....|:..||.| |.|..:...:      |.
  Rat   208 GRAEESVVRTKRMVGP---------VEVKEEENFFCGPPEKKLAKL-VFVSTSGGSL------WN 256

  Fly   175 LR---DMCNMPSTPSFEGIYYIEQILRHL---IPCSIITPLDC--FWEGSQLLGPESAVVIPGLN 231
            |:   .||.:..          |||..|:   ..|......:|  .|.    ||...||      
  Rat   257 LQAIHSMCRIEQ----------EQIRSHISFGALCQRSAANECCPSWS----LGNYLAV------ 301

  Fly   232 QRLLWTTLNPASVMQYMKQKMSEEKISFDFETVEQYMKR-----AAIGSGYMEKPCLNPLNPNCP 291
                   |:..|..|...|..::..::. ......:..|     |.:||| .:||      |.|.
  Rat   302 -------LSNRSSCQDTTQADTDRTLAL-LRFCATFYHRGVLVPACVGSG-QDKP------PFCA 351

  Fly   292 DTAPNKNSTQPPDVGAILSGGCYGYAAKHMHWPEELIVGGAKRNRSGHLRKAQALQSVVQLMTEK 356
            . .|.|               |.|                           :.|:..::..:.::
  Rat   352 Q-VPAK---------------CTG---------------------------SSAVYQLLHFLLDR 373

  Fly   357 EMYDQWQDNYKVHHLGWTQ-----EKAAEVLNAWQRNFSREVEQLLRKQSRIATNYDIYVFSSAA 416
            :.......:|:|..|.:..     .|.:.:|:.:.......:        :::.||.........
  Rat   374 DFLSPQTADYQVPSLKFALLFLPIIKTSSLLDIYLDGLGDPI--------KVSDNYTSISGMDLG 430

  Fly   417 LDDILAKF------SHPSALSIVI---GVAVTVLYAFCTLLRWRDPVRGQSSVGVAGVLLMCFST 472
            |...|.|:      .:| .||:||   |:::.:...|.|.:         |.:||.|.|::.|  
  Rat   431 LKPRLLKYYLAEDTMYP-LLSLVIIFFGMSLYLRSLFITFM---------SLLGVLGSLMVAF-- 483

  Fly   473 AAGLGLSALLGIVFNAASTQVVPFLAL-------GLGVDHIFMLTAAYAESNRREQTKLILKKVG 530
                   .|..:.|..|   ..||:.|       |:.|::..:....:..|..:..:..:..:||
  Rat   484 -------FLYHVAFRMA---YFPFVNLASLLLLSGVCVNYTLIFFDLWRLSRGQVPSGGLAHRVG 538

  Fly   531 PS-------ILFSACSTAGSFFAAAFIPVPALKVFCLQAAIVMCSNLAAALLVFPAMISLDLRRR 588
            .:       :|.|..:|:.:|:.:....:|.::.|.|.....:..::...||..||.:.|..|..
  Rat   539 RTMHHFGYLLLVSGLTTSAAFYGSYLSRLPTVRCFALFMGTAVLVHMGLTLLWLPATVVLHERYL 603

  Fly   589 TAGRADIFCCCFPVWKEQPKVAPPVLPLNNNNGRGARHPKSCNNNRVPLPAQNPLLEQRADIPGS 653
            ..|       |....:.|               ||...|.     |:.|     .|.:|..|...
  Rat   604 AHG-------CVAQAQGQ---------------RGGSDPL-----RLLL-----ALHRRIRILRK 636

  Fly   654 SHSLASFSLATFAFQHYTPFLMRSWVKFLTVMGFLAALISSLY---ASTRLQDGLDIIDLVP--- 712
            ..|:    |:...||...|..:..: :::.:..|.|......|   .|.||:  |.|  |:|   
  Rat   637 IFSI----LSRLLFQRLLPCGVIKF-RYIWICWFAALAAGGAYIGGVSPRLR--LPI--LLPLGG 692

  Fly   713 ---KDSNEHKFLDAQTRLFGFYSMYAVTQGNFEYPTQQQLLRDYHDSFVRVPHVIKNDNGGLPDF 774
               :.|:..:..||:.|                   ||.|..|       :|   .|:.|.||  
  Rat   693 QFFRSSHPFERFDAEYR-------------------QQFLFED-------LP---PNEGGNLP-- 726

  Fly   775 WLLLFSEWLGNLQKIFDEEYRDGRLTKECWFPNASSDAILAYKLI-VQTGHVDNPVDKELVLTNR 838
                                                 .:|.:.:: |.|   .:|:|..   ||.
  Rat   727 -------------------------------------VVLVWGILPVDT---SDPLDPR---TNS 748

  Fly   839 LVNSD-------------------GIINQRAFYNYLSAWAT------NDVFAYGASQGKL----- 873
            .|.||                   |..||..|.:....|.|      ...:....|.|:|     
  Rat   749 SVVSDPDFSPSSPEAQEWLQALCQGAQNQSFFGDQPEGWPTLCLVEALQQWMESPSCGRLGADLC 813

  Fly   874 -----YP-EPRQYFH---------QPN-------EYD---------LKIPKSLPLVYAQMPFYLH 907
                 :| .|:.|.|         .|:       .:|         ||...:||......|.: |
  Rat   814 CGQSEFPWAPQLYLHCLKMMALEQSPDGTRDLGLRFDSHGNLAALVLKFQTNLPYSTEYGPVH-H 877

  Fly   908 GLTDTSQIKTLIGHIRDLSVKYEGFGLPNYPSGIP---FIFWEQYMTLRSSLAMILACVLLAALV 969
            ..|:.|         |.||.:     :...|.|:.   |....:..:|:.||:...|.||..||.
  Rat   878 FYTEVS---------RWLSTE-----MSKAPPGLNKGWFTSTLELYSLQHSLSTEPAVVLGLALA 928

  Fly   970 LV-SLLLLSVWAAVLVILSVLASLAQIF---GAMTLLGIKLSAIPAVILILSVGMMLCFNVLISL 1030
            |. :.|||..|...|.:.||.|....:.   |.:.||..:|:...|:.|..|||:.:...|...:
  Rat   929 LAFATLLLGTWNVPLSLFSVAAVAGTVLLTVGLLVLLEWQLNTAEALFLSASVGLSVDLTVNYCI 993

  Fly  1031 GF-MTSVGNRQRRVQLSMQMSLGPLVHG---MLTSGVAVFMLSTSPFEFVIRHFCWLLLVVLCVG 1091
            .: :....:|..||..|::.:......|   :..||| :.:.||.   .:.|....::::|..:|
  Rat   994 SYHLCPHPDRLSRVAFSLRQTSRATAMGTGVLFASGV-IMLPSTI---LLYRKLGIIVMMVKFLG 1054

  Fly  1092 ACNSLLVFPILLSMVGPEAE----LVPLEH---------PD---RISTP--------SPLPVR-- 1130
            ...:...|..|....|||..    |.|..|         ||   |...|        .||..|  
  Rat  1055 CGFASFFFQSLCCFFGPEKNCGQILWPCAHLPWDAGTEDPDEKGRTGPPGFSEHYELQPLARRRS 1119

  Fly  1131 --------SSKRSGK-SYVVQGSRSSRGSCQKSH------------HHHHKDLNDPSLTT----- 1169
                    :||.|.: |.:.:..:...|||...|            .|.......|:|.|     
  Rat  1120 PSFDTSTATSKLSHRPSILSEDLQIHDGSCCLQHAQVPVSPRDLLLDHQTVFSQCPALQTSSPYK 1184

  Fly  1170 -ITEEPQSWKSSNSSIQMPNDWTYQPREQRPASYAAPPPAYHKAAAQQHHQHQGPPTTPPPPFPT 1233
             :...||:|...:|..|..     :|.:..|                     :||...|.|....
  Rat  1185 QVGPNPQTWIRQDSQGQKT-----EPLQALP---------------------EGPAHCPKPKVME 1223

  Fly  1234 AYPPEL--------------------------QSIVVQPEVTVETTH 1254
            ..|..|                          .|:...|||...|.|
  Rat  1224 ELPDGLCSSASTLEGLSVSDDTCASEPSVRVPDSVGTSPEVMNGTGH 1270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ptcNP_523661.2 2A060602 17..1134 CDD:273338 227/1180 (19%)
MMPL 454..598 CDD:304422 31/157 (20%)
Disp2NP_001101229.2 MMPL <448..598 CDD:419723 35/170 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348787
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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