DRSC/TRiP Functional Genomics Resources

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Protein Alignment ptc and PTCHD1

DIOPT Version :9

Sequence 1:NP_523661.2 Gene:ptc / 35851 FlyBaseID:FBgn0003892 Length:1286 Species:Drosophila melanogaster
Sequence 2:NP_775766.2 Gene:PTCHD1 / 139411 HGNCID:26392 Length:888 Species:Homo sapiens


Alignment Length:828 Identity:162/828 - (19%)
Similarity:310/828 - (37%) Gaps:216/828 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   329 VGGAKRNRSGHLRKAQALQSVVQLMTEKEMYDQWQDNYKVHHLGWTQEKAAEVLNAWQRNFSREV 393
            :||...:....::.|:|:|....|.:...:.|.                   |...|:.:|...|
Human   192 LGGVTVHSKDRVKSAEAIQLTYYLQSINSLNDM-------------------VAERWESSFCDTV 237

  Fly   394 EQLLRKQSRIATNYDIYVFSSAALDDILAKFSHPSALSIVIGVAVTVLYAF--CTLLRWRDPVRG 456
            ....:..|::    .:|.::|::|.:...|.|..|...:|..:.:.|..|.  |::   :|.||.
Human   238 RLFQKSNSKV----KMYPYTSSSLREDFQKTSRVSERYLVTSLILVVTMAILCCSM---QDCVRS 295

  Fly   457 QSSVGVAGVLLMCFSTAAGLGLSALLGIVFNAASTQV-VPFLALGLGVDHIFMLTAAYAESNRRE 520
            :..:|:.|::.:..:|....|:..|.|..:|  ||.: |||:.||.|:...|.:.:::.::...:
Human   296 KPWLGLLGLVTISLATLTAAGIINLTGGKYN--STFLGVPFVMLGHGLYGTFEMLSSWRKTREDQ 358

  Fly   521 QTKLILKKVGPSILFSACSTAGSFF------AAAFIPVPALKVFCLQAAIVMCSNLAAAL----- 574
            ..|.....|....:.|...|...:.      |:.|..:.|.::||..:.|.:..|....|     
Human   359 HVKERTAAVYADSMLSFSLTTAMYLVTFGIGASPFTNIEAARIFCCNSCIAIFFNYLYVLSFYGS 423

  Fly   575 -LVFPAMISLDLRRRTAGRADIFCCCFPVWKEQPKVAPPVLPLNNNNGRGARHPKSCNNN----R 634
             |||...|..:.:.      .|||      ::.||                  |::....    |
Human   424 SLVFTGYIENNYQH------SIFC------RKVPK------------------PEALQEKPAWYR 458

  Fly   635 VPLPAQNPLLEQRADIPGSSHSLASFSLATFAFQHYTPFLMRSWVKFLTVMGFLAALISSLYAST 699
            ..|.|:  ..|..|: ...:::..|..|..|..::|..::..::||...|:.:|..:..:|....
Human   459 FLLTAR--FSEDTAE-GEEANTYESHLLVCFLKRYYCDWITNTYVKPFVVLFYLIYISFALMGYL 520

  Fly   700 RLQDGLDIIDLVPKDSNEHKFLDAQTRLF-------GFYSMYAVTQGNFEYPTQQQLLRDYHDSF 757
            ::.:|.|:.::|...:...::..||.:.|       |||...::...|..  .|:.:| :|...|
Human   521 QVSEGSDLSNIVATATQTIEYTTAQQKYFSNYSPVIGFYIYESIEYWNTS--VQEDVL-EYTKGF 582

  Fly   758 VRVPHVIKNDNGGLPDFWLLLFSEWLGNLQKI----------FDEEYRDGRLTKECWFPNASSDA 812
            ||:.             |   |..:|..|:|:          |.:..|:..| |...|.:...|.
Human   583 VRIS-------------W---FESYLNYLRKLNVSTGLPKKNFTDMLRNSFL-KAPQFSHFQEDI 630

  Fly   813 ILAYKLIVQTGHVDNPVDKELVLTNR--LVNSDGIINQRAFYNYLSAWATNDVFAYGASQGKLYP 875
            |.:.|       .::.||   |:.:|  ||......|:...|:.|..                  
Human   631 IFSKK-------YNDEVD---VVASRMFLVAKTMETNREELYDLLET------------------ 667

  Fly   876 EPRQYFHQPNEYDLKIPKSLPLVYAQMPFYLHGLTDTSQIKTLIGHIRDLSVKYEGFGLPNYPSG 940
                                          |..|:.||::|.::.:                || 
Human   668 ------------------------------LRRLSVTSKVKFIVFN----------------PS- 685

  Fly   941 IPFIFWEQYMTLRSSLAMIL--ACV-----LLAALVLVSLLLLSVWAAVLVILSVLASLAQIFGA 998
              |::.::|   .|||...|  :|:     |..:..||:..|::||    :.|:|::....:.|.
Human   686 --FVYMDRY---ASSLGAPLHNSCISALFLLFFSAFLVADSLINVW----ITLTVVSVEFGVIGF 741

  Fly   999 MTLLGIKLSAIPAVILILSVGMML--CFNVLISLGFMTSVGNRQRRVQLSMQMSLGPLVHGMLTS 1061
            |||..::|..|..:.||..:...:  |..:| |...:.....|.:.|:.::::....::...|..
Human   742 MTLWKVELDCISVLCLIYGINYTIDNCAPML-STFVLGKDFTRTKWVKNALEVHGVAILQSYLCY 805

  Fly  1062 GVAVFMLSTSPFEFVIRHF-CWLLLVVLCVGACNSLLVFPILLSMVGP 1108
            .|.:..|:..|.......| |..|:..:....|.::|  |::|:.:.|
Human   806 IVGLIPLAAVPSNLTCTLFRCLFLIAFVTFFHCFAIL--PVILTFLPP 851

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ptcNP_523661.2 2A060602 17..1134 CDD:273338 162/828 (20%)
MMPL 454..598 CDD:304422 36/156 (23%)
PTCHD1NP_775766.2 Patched 105..851 CDD:355433 161/826 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165154913
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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