DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ptc and disp3

DIOPT Version :9

Sequence 1:NP_523661.2 Gene:ptc / 35851 FlyBaseID:FBgn0003892 Length:1286 Species:Drosophila melanogaster
Sequence 2:XP_021334179.1 Gene:disp3 / 100535855 ZFINID:ZDB-GENE-081104-407 Length:1319 Species:Danio rerio


Alignment Length:1267 Identity:222/1267 - (17%)
Similarity:407/1267 - (32%) Gaps:423/1267 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 QEGGRLEAELAYTQK------TIGEDESATHQL----LIQTTHDPNASVLHPQALLAHLEVLVKA 161
            |.|.....|:...:|      |:...::..|:.    |::|........|..|||.         
Zfish   171 QFGNEKNKEMKEREKDSSISATLNSSDAEDHKKPDSPLMRTRRFAGYPYLQTQALW--------- 226

  Fly   162 TAVKVHLYDTEWGLRDMCNMPSTPS-FEGIYYIEQIL-RHLIPCSIITPLDCFWEGSQLLGPESA 224
               ::.|.....|.:|  |...||. ...|:::|::| :|                     |:. 
Zfish   227 ---RIELVFVAQGDKD--NNIFTPDRLHTIHHVERVLMQH---------------------PQF- 264

  Fly   225 VVIPGLNQRLLWTTLN--------------PASVMQYMKQKMSEEKISFDFETVEQYMKRAAIGS 275
                   |:..|..|.              |:||:.|:.......||.:|             |.
Zfish   265 -------QQFCWKPLEALQDLPLGPSFCSPPSSVLSYLFPSERAGKIYYD-------------GM 309

  Fly   276 GYMEKPCLNPLNPNCPDTAPNKNSTQPPDVGAILSGGCYGYAAKH--MHW-------PEELIVGG 331
            |              ||.|         |:...||     .|..|  .:|       |::|    
Zfish   310 G--------------PDLA---------DIHGALS-----LAITHPQFYWYVDESLTPDKL---- 342

  Fly   332 AKRNRSGHLRKAQALQSVVQLMTEKEMYDQWQDNYKVHHLGWTQEKAAEVLNAWQRNFSREVEQL 396
                      ::..|:|.:........:...||            :..|....: |:|..:...:
Zfish   343 ----------QSSLLRSEIHFGAPLPSFYSLQD------------RPLEQRRLF-RDFVVQYAGI 384

  Fly   397 LRKQSRIATNYDIYVFSSAAL--DDILAKFSHPSALSIVIGVAVTVLYAFCTLLRWRDPVRGQSS 459
            |.:||   |:....::....|  |::...|:....|::..|..:|||....|...          
Zfish   385 LAQQS---TSKVKVLYGGTELFDDEVRKTFNSDMLLALFSGGCITVLVYVLTSFS---------- 436

  Fly   460 VGVAGVLLMCFSTAAGLGLSALL---------GIVFNAASTQVVPFLALGLGVDHIFMLTAAYAE 515
                  :.:.|...|.:|||.|:         |:.:......|..|:.:|:|||.:|:..:.:.:
Zfish   437 ------VFLTFFGLASIGLSCLVALFLYHVVFGVKYLGILNGVAAFVIIGIGVDDVFVFISTFRQ 495

  Fly   516 S-------NRREQTKLILKKVGPSILFSACSTAGSFFAAAFIPVPALKVFCL-QAAIVMCSNLAA 572
            |       .|...|   :|..|.:...::.:||.::.|..|..:||:..|.| .:.||.|..|..
Zfish   496 SVHLTCPMQRMIST---MKTAGRATFLTSFTTAAAYAANTFSQIPAVHDFGLFMSLIVSCCWLWV 557

  Fly   573 ALLVFPAMISLDLRRRTAGRADIFCCCFPVWKEQPKVAPPVLPLNNNN-----------GRGARH 626
            ::|: ||.:.: .....|.||:   .|...|....|::....||::::           |.....
Zfish   558 SVLM-PAALCI-WSSCGAARAN---SCPRWWTTLTKLSSSPGPLSDDDDVALITVEMEPGVYDSE 617

  Fly   627 PKSCNNNRVPLPAQNPLLEQRADIPGSSHSLASFSLATFAFQHYTPFLMRSWV------KFLTVM 685
            |.:.            ||....:.|.|:.:..:..:.:...|.    |:|.||      |..|::
Zfish   618 PDAA------------LLSLSTEAPLSASTEGNVGVVSAHIQR----LLRCWVAEPVVEKRKTII 666

  Fly   686 G-FLAALISSLYASTRLQDGLDIIDLVPKDSNEHKFLDAQTRL----------FGFY-------- 731
            | :...|:.|::....|:.......|..:|:|..:.||.::.|          .|.:        
Zfish   667 GVYAVVLLGSVWCCCLLRPASHAPVLFHRDTNLQRLLDMRSNLSAQGISCHMCSGVFMERPHNLH 731

  Fly   732 ---SMYAVTQGNF-EYPTQQQ--------------LLRDY--------------HDSFVRVP--- 761
               ...:.|.||. ..|:.|.              ||..|              :.....||   
Zfish   732 STADFTSSTSGNHPTIPSNQSKPASNSSAQTLAGGLLTVYVFKLEMGSAVPLYRYSLSASVPAPW 796

  Fly   762 HVIKNDNGGLPDF---------------------------WLLLFSEWLGNLQKIFD-------- 791
            ......:|.:|.|                           |:|......|:.:.|.:        
Zfish   797 QASSAAHGDVPSFQAYSSPHSNFSTRISVCVSHAYHPRPRWMLTLRSCDGSRRWIAEFEFYVASV 861

  Fly   792 EEYRDGRL-----------TKECWFP-----------------NASSDAILAYKLIVQT------ 822
            |:.|..:|           ::.|..|                 .|...|..|...|.:|      
Zfish   862 EQQRSRKLYFAQHTISPYPSRVCEGPPGCVFSSGPDGPTQGSFYAPLPAAPAQVKISRTSGFNPC 926

  Fly   823 --GHVDNPVDKELVLTNRLV----NSDGIINQRAFYNYLSAWATN-------DVF---------- 864
              |....|..:.||.|..:|    ...|:...:...|::.....|       |||          
Zfish   927 SGGKCGKPAVRPLVDTGAMVFVVFGILGVNRTQRLDNHVIGDLGNVIYDQDFDVFNEIGHLCKLC 991

  Fly   865 -AYGASQGKLYPEPRQYFHQPNEYDLKIPKSLPLVYAQM-----PFYLHGLTDTSQIKTLIGHIR 923
             ...|:...:.|...|.....|    .:...|||::.:.     |..|.|......:....|.:.
Zfish   992 KVISANTNLVKPGGAQCLPSGN----SLTSILPLLHPECHSLPEPNLLPGQLSHGAVGLQGGRVH 1052

  Fly   924 DLSVKYEGF---GLPNYPSGIPFIFWEQYM-----TLRSSLAM---------------------- 958
            .:|:.:|..   |..::.:...|:.||.::     :|.:|.|:                      
Zfish  1053 WISMAFESTTYKGKSSFQTHADFLQWESFLQKQLASLPASSALRRGFQTCQHWKQIFMEIIGVES 1117

  Fly   959 -ILACVLLAALVLVSLLLLSVWAAVL--VILSVLASLAQIFGAMTLLGIKLSAIPAVILILSVGM 1020
             :.:.:|..|:.:.|:.:.:....:|  ::||:|..:..:...|..||.::.|:.|:.|.:.||.
Zfish  1118 ALYSLLLSLAICIASVAVFTAHPLLLLPILLSILGMVCLVVAVMYWLGWEMGAVEAISLSILVGS 1182

  Fly  1021 MLCFNVLISLGFMTSVGNRQRRVQLSMQMSLGPL-----VHGMLTSGVAVFMLSTSPFEFVI--- 1077
            .:.:.:.:..|::.:.......:..|::..:..|     |...:.|.....::||.|..|.:   
Zfish  1183 SVDYCLHLVEGYLLAGDTETSGLDPSIKRQIRTLEAANHVGVAIVSSAVTTVISTIPLFFCVIVP 1247

  Fly  1078 -RHFCWLLLVVLCVGACNSLLVFPILLSMVGP 1108
             ..|..::.:...:....:|.|...||:.:||
Zfish  1248 FAKFGQIVAINTAISIAFTLTVTTALLAAMGP 1279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ptcNP_523661.2 2A060602 17..1134 CDD:273338 222/1267 (18%)
MMPL 454..598 CDD:304422 37/160 (23%)
disp3XP_021334179.1 Patched 226..>602 CDD:330476 96/513 (19%)
COG1033 <1157..>1274 CDD:331188 20/116 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589941
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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