DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gle1 and GLE1

DIOPT Version :9

Sequence 1:NP_610400.1 Gene:Gle1 / 35849 FlyBaseID:FBgn0033316 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_010074.1 Gene:GLE1 / 851320 SGDID:S000002366 Length:538 Species:Saccharomyces cerevisiae


Alignment Length:629 Identity:137/629 - (21%)
Similarity:239/629 - (37%) Gaps:164/629 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 ESPAPEPNNEIPLLPKIDFEPNISCFPDLQAINASIVRRE-LEEEGKRCVRQQLKAIRDKQDAMR 118
            :.|.|||:..|.|       |:.:.....:.:|.|:|..: ..|...|.:..|.|.|...:..:.
Yeast    31 QCPTPEPSPAIKL-------PSFTKVGTKKLVNESVVILDPALENALRDLNLQSKLIPINEPIVA 88

  Fly   119 LS-----RETQQRKEERQRDQLQQKALRERNESLLIQKADQMTAAQLEAQQREQLALRQQIDQKL 178
            .|     ..|...........|...|           |....||..||       |:.:...:|:
Yeast    89 ASSIIVPHSTNMPLPRASHSSLLDNA-----------KNSNATAPLLE-------AIEESFQRKM 135

  Fly   179 HKLALEGVSRCQRRFNQKYEGIAKILLSLNPETVKVCAAQNTQLKELGQKFEQLVSSVKMGNCEM 243
            ..|.|.         |||                     :...::|..::.|           |.
Yeast   136 QNLVLA---------NQK---------------------EIQSIRENKRRVE-----------EQ 159

  Fly   244 QSQFLCSIIKAEEFCKSLDALELDIIKQLAEFSEQIQQQLKMEAAKKLEDERQR--------QQQ 300
            :.:      |.||..|..:|            .|:.:::.::...||.|:||:|        ||:
Yeast   160 RKR------KEEEERKRKEA------------EEKAKREQELLRQKKDEEERKRKEAEAKLAQQK 206

  Fly   301 QEEERQKLEEQQKLEEQEKLRKEKEESAAKEKQQEAETAKADAANVPAPLEPKSQDVPPAATATS 365
            |||||:|:|||.  |::.:|:||.|   ||..||:.:..||                     .|:
Yeast   207 QEEERKKIEEQN--EKERQLKKEHE---AKLLQQKDKLGKA---------------------VTN 245

  Fly   366 TSVHPDRLKFYNDILALYQSKVDAVKPL-QTEESLKQYRTGCQRAINLPLNAISAVSPQHLAQNF 429
            ..........|.|.:|  |.|.|.|.|: :.:.:::...:..:|.||.....::. |.|.|.:..
Yeast   246 FDKISKMFWHYKDKIA--QIKQDIVLPIKKADVNVRNLLSRHKRKINPKFGQLTN-SNQQLFKIQ 307

  Fly   430 DKLYSFFAGQPTKVMNGTITINDHPLARDYCMLLMAKKFVSQTETAICSNPQAAFPFASVIITFW 494
            ::|        |:::|.|   ....||..:.:..:||..|.|.||.:...|::|.|...:.:...
Yeast   308 NEL--------TQLINDT---KGDSLAYHWILNFIAKAVVHQAETEVRVKPESALPLGKLTLYLL 361

  Fly   495 KLLPDFGKVFLAYMYKESPFLVPYV--IPQQQGQTPEQYLKTIGYRLTDKNELEKPDIYLKRQTG 557
            ...|:..::|:|.:.|:.||::.:.  |..::|:      :.:|::..::|:.|....|.:|..|
Yeast   362 VQFPELQELFMARLVKKCPFVIGFTCEIDTEKGR------QNMGWKRNNENKWEDNTSYDERMGG 420

  Fly   558 LARLYAAVIISQGRKAAGPDEC-------FELNEGWLWLAHMVHVKPLPDISAT---LIMEILQT 612
            :..|:|.:     .:...|.|.       |.:...|..||.:.:. ||..|:.|   ::......
Yeast   421 ILSLFAII-----TRLQLPQEFITTTSHPFPIALSWHILARICNT-PLNLITNTHFVILGSWWDA 479

  Fly   613 LGFELWRTYGKQFVKLLVYIQNIYMPQLAAYDEGGPKTRLEMLL 656
            ...:..:.||.|..|||:.|......::|.....| ..||.:||
Yeast   480 AAVQFLQAYGNQASKLLILIGEELTSRMAEKKYVG-AARLRILL 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gle1NP_610400.1 COG4026 <82..>200 CDD:226513 24/123 (20%)
GLE1 384..631 CDD:369538 58/259 (22%)
GLE1NP_010074.1 GLE1 273..496 CDD:400257 51/246 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346353
Domainoid 1 1.000 49 1.000 Domainoid score I2956
eggNOG 1 0.900 - - E1_KOG2412
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I1630
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003814
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103111
Panther 1 1.100 - - LDO PTHR12960
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R492
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.820

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