DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gle1 and GLE1

DIOPT Version :9

Sequence 1:NP_610400.1 Gene:Gle1 / 35849 FlyBaseID:FBgn0033316 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_172771.1 Gene:GLE1 / 837869 AraportID:AT1G13120 Length:611 Species:Arabidopsis thaliana


Alignment Length:643 Identity:126/643 - (19%)
Similarity:246/643 - (38%) Gaps:150/643 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 EPPLPEE----SPAPEPN----NEIPLLPKIDFEPN-ISCFPDLQAINASIVRRELEEEGKRCVR 104
            |||.|:.    |..||||    :.:..:..::.:.| .|.:|  |.|..:.:|.     |:    
plant     6 EPPCPKSVDGISIDPEPNWNFESLVAEIASVEKKLNGFSMYP--QPITNTTLRM-----GR---- 59

  Fly   105 QQLKAIRDKQDAMRLSRETQQRKEERQRDQLQQKALRERNESLLIQKADQMTAAQLEAQQREQLA 169
                  |.....|.:|.:..:..|..:.|..::    |.:.|.:.....:....:|.........
plant    60 ------RGGGFVMHVSEDEMESDEGEESDDEEE----EEDHSQICTAGKRFACDELYLSDESDEE 114

  Fly   170 LRQQIDQKLHKLALEGVSRCQRRFNQKYEGIAKILLSLNPETVKVCAAQNTQLKELGQKFEQLVS 234
            ...:.:..::||                 |:|:..|      .:|.....|::|:..:....:|.
plant   115 FDHEPEYMMNKL-----------------GLAESAL------YEVINDHQTEIKDDIRNQVSVVE 156

  Fly   235 SVKMGNCEMQSQFLCSIIKAEEFCKSLD-ALELDIIKQLAEFSE----QIQQQLKMEAAKKLEDE 294
            :..|...|.....:..:.|..|..|.:: .|:|...:::||..:    .:|::.|:::  ::|:.
plant   157 TEIMNEIETSLSAIARVEKYSETRKEVERKLDLQYQRKVAEALDTHLTAVQREHKIKS--QIEER 219

  Fly   295 RQRQQQ-QEEERQKLEEQQKLEEQEKLRKEK--------------EESAAKEKQQEAETAKADAA 344
            :.|.:: |||.|:|    ::..::||:|:||              ||....|::...|.|:.:.|
plant   220 KIRSEEAQEEARRK----ERAHQEEKIRQEKARAEAQMLAKIRAEEEKKEVERKAAREVAEKEVA 280

  Fly   345 NVPAP----LEPKS--QDVPPAATATSTSVHPDRLKFYNDILALYQSKVDAVKPLQ-TEESLKQY 402
            :..|.    .|.|:  :.|..::..::.....:.::.....|.|...::..::.|: |.:|||..
plant   281 DRKAAEQKLAEQKAVIESVTGSSATSNAQAGGNSIRAAESALILENHRLKKLEELETTNQSLKSR 345

  Fly   403 RTGCQRAINLPLNAISAVSPQHLAQNFDKLYSFFAGQPTKVMNGTI-----TIND-HPLARD--- 458
            ..                      :||.. :....|:..:.::||.     .||| ..:.:|   
plant   346 SN----------------------ENFSS-FEKHIGRVIRQISGTKDSVSGKINDIVKIFKDPRC 387

  Fly   459 ---YCMLLMAKKFVSQTETAICSNPQAAFPFASVIITFWKLLPDFGKVFLAYMYKESPFLVP-YV 519
               ..:...|||.|:..|.   .||   |..:.||:......|....:.||..:|...:.|| ::
plant   388 PVSISIAAFAKKMVTTKEK---PNP---FACSYVIVYINSQFPQVMDILLAEFHKACIYTVPKHI 446

  Fly   520 IPQQQGQTPEQYLKTIGYRLTDKNELEKPDIYLKRQTGLARLYAAVIISQGRKAAGPDECFELNE 584
            :..|.....:.|                     :|...:.|||.|::.:..| .........:..
plant   447 VNSQSAWDSDAY---------------------ERLDSIMRLYGALVQTDIR-VGNATNVHGIEH 489

  Fly   585 GWLWLAHMVHVKPLPDISATLIMEILQTLGFELWRTYGKQFVKLLVYIQNIYMPQLAA 642
            ||.|||..::..|....:||.:...|||.||.|.:.|..||:|::..::..::.:|.|
plant   490 GWAWLARFLNKIPANRATATALNSFLQTAGFGLHQRYKSQFLKVVNVVREHFLQKLRA 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gle1NP_610400.1 COG4026 <82..>200 CDD:226513 14/117 (12%)
GLE1 384..631 CDD:369538 56/260 (22%)
GLE1NP_172771.1 ATP-synt_B 194..319 CDD:304375 26/130 (20%)
GLE1 330..536 CDD:285108 56/256 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2412
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 65 1.000 Inparanoid score I2508
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003814
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103111
Panther 1 1.100 - - LDO PTHR12960
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4260
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.860

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