DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gle1 and gle1

DIOPT Version :10

Sequence 1:NP_610400.1 Gene:Gle1 / 35849 FlyBaseID:FBgn0033316 Length:677 Species:Drosophila melanogaster
Sequence 2:XP_002935547.1 Gene:gle1 / 100491445 XenbaseID:XB-GENE-972613 Length:687 Species:Xenopus tropicalis


Alignment Length:658 Identity:172/658 - (26%)
Similarity:308/658 - (46%) Gaps:109/658 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 DFEPNISCFPDLQAINASIVRRELEEEGKRCVRQQLKAIRDKQDAMRLSRETQ---QRKEERQRD 133
            |||.:.|.|         ::::..|..     :..:||....:....:|.|.:   ....|.:|.
 Frog    85 DFETDFSDF---------VIKKTPESH-----QDSMKAETSPKLLSEISAEVEGSIYLYREAERI 135

  Fly   134 QLQQKALRERNESLLIQK--ADQMT------AAQLEAQQREQLALRQQIDQKLHKLALEGVSRCQ 190
            ::|.|..:.....:..:|  |||.|      ...:|.:||::   |.::.::|.:.:.|.:.: |
 Frog   136 KMQNKIQKRLEMFVQYEKNFADQATEQLKRFEEMMELKQRQE---RDRLQEQLEEGSKEALGQ-Q 196

  Fly   191 RRFNQKYEGIAKILLSLNPETVKVCAAQNTQLKELGQK--FEQLVSSVKMGN------CEMQSQF 247
            .:..:::...||:|              |.:|:|..|:  .||.....:.|.      |.:|.:.
 Frog   197 EKLKEEHRTRAKLL--------------NRKLREAEQQRHLEQERIRQEEGRDRERRLCFLQQEV 247

  Fly   248 LCSIIKAEEFCKSLDALELD-------------IIKQLAEFSEQ----IQQQLKMEAAKKLEDER 295
            |..:.:.|...|..:.|.:|             |:..:...|||    .|:.:.:       .||
 Frog   248 LQLVQQIEVDYKHQETLRMDLSAYSQRGNQICGILSSVVRSSEQSGFPTQEDVNV-------GER 305

  Fly   296 QRQQQQ------EEERQKLEEQQKLEEQEKLRKEKEESAAKEKQQEAETAKADAANVPAPLEPKS 354
            ..|:.|      ::|....||::|.||..:..|:||    .||||....|.|     ||....||
 Frog   306 SLQEMQALVSSMQKEVSAAEERRKAEEVAERVKQKE----LEKQQTKAQAPA-----PAQTHQKS 361

  Fly   355 QDVPPAATATSTSVHPDRLKFYNDILALYQSKVDAVKPLQ--TEESLKQYRTGCQRAINLPLNAI 417
            |     .........|..:|.|..:..:.:..::...|||  .:..:|..|...|:||.:|::.|
 Frog   362 Q-----KEGLQEKASPCIMKSYQQLQNMCEQSLNDFAPLQDARDPKVKAIRGDLQKAIYIPVSQI 421

  Fly   418 SAVSPQHLAQNFDKLYSFFAGQPTKVMNGT-ITINDHPLARDYCMLLMAKKFVSQTETAICSNPQ 481
            |:.:..:|.:.|:||.:...|:.......: |:::.||.|.|:....:|:|.|.|.|..|.|:.:
 Frog   422 SSKAGSNLKEIFEKLNNLLLGKRVSSFGSSMISVSQHPQALDFVYYKLAEKLVKQGEEEIASHHE 486

  Fly   482 AAFPFASVIITFWKLLPDFGKVFLAYMYKESPFLVPYVIPQQQGQTPEQYLKTIGYRLTDKNELE 546
            ||||.|:|....|:..|..|::|||::||:.|:.:|:....::|.:.|:|.:.:||::.| :::|
 Frog   487 AAFPIAAVASGIWEHHPKVGELFLAHLYKKCPYALPFYPAFKEGTSIEEYQRILGYKVED-SQVE 550

  Fly   547 KPDIYLKRQTGLARLYAAVI----ISQGRKAAGPDECFELNEGWLWLAHMVHVKPLPDISATLIM 607
            :.|.:|||.:|:.||||||:    ....::.:.|   ..||..|.||..:::::|:.||::||:.
 Frog   551 QQDNFLKRMSGMIRLYAAVMQIRWYYSNKQESHP---HGLNYAWQWLGQLLNMEPVADITSTLLY 612

  Fly   608 EILQTLGFELWRTYGKQFVKLLVYIQNIYMPQ---LAAYDEGGPKTRLEMLLAKFLRERQIAQAV 669
            :.|:..|..|.:||..||.|||:.|:|.|:|:   ::...:.|..|||.:.|...:::.:|....
 Frog   613 DFLEVCGNALMQTYHFQFWKLLLLIKNEYLPRIEIISTSAQMGSVTRLRLFLENSIKKNEIPLPK 677

  Fly   670 GVLPPGFW 677
            |.|...||
 Frog   678 GYLSQSFW 685

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gle1NP_610400.1 Smc <82..>232 CDD:440809 29/162 (18%)
EnvC 104..>365 CDD:443969 66/302 (22%)
GLE1 394..633 CDD:462280 81/245 (33%)
gle1XP_002935547.1 PTZ00121 <107..370 CDD:173412 66/301 (22%)
GLE1 400..638 CDD:462280 80/241 (33%)

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